| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1398 |
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| Symbol | |
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| ID | 4674226 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1464723 |
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| End bp | 1467590 |
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| Gene Length | 2868 bp |
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| Protein Length | 955 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639838507 |
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| Product | hypothetical protein |
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| Protein accession | YP_985689 |
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| Protein GI | 121593793 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTGGA AACTTCCCTG GCCGAAGCTG GCCGCATCCA GCGCCAGCGA CGACGAGCAG
CCGGACGGTT GGCAGCGCCA CGTCGATGCC TTGCGCCAGG CCGGCATCCC CGAACCTGGC
GCAGCGGTCC AGGGCCGCAG GCCGGCGACG GTAGCCGACG AGCAGGCGCT GTACGACGTC
GCACCGTCGT TCGCGGAACT GCTGCCTTGG GTGGAGTTCC TGCCGCAGTC GAAGTCCATG
CTGCTGGAGG ATGGGCAGTC GGTCGCTGCC TTCTACGAGC TGGTGCCGCT GGGCACCGAG
GGCCGGGAAC CCGGCTGGCT TGCGCATGCC CGCGATGCCT TGGAGAACGC GCTCCAGGAC
TCGTTCGATG AGCTGGACGA AAACCCCTGG GTGCTCCAGC TCTACGCCCA GGACGAGCCC
AGCTTCGACC AGTACATGCA GACCCTGCGC GACTATGTGC AGCCGCGCGC CCGGGATACC
GCGTTCACCG AATTCTACCT GCGCTTCTTC GGCCACCATC TGCGCGCGGT CGCCAAGCCG
GGCGGCCTGT TCGAGGACAC GGTAGTCACG CGGCTGCGCT GGCGCGGCCA GACGCGGCGG
GTGCGCATGG TGATCTATCG CCGTGCCACC GGGCAGGCAA GCCGCCGCGG CCAGACACCC
GAGCAGATGC TGAACATCGT CTGCGACCGC CTGTGCGGCG GCTTGGCGAA CGCCGGCATC
CAGGCACGGC GCATGGTCGC AGCCGACGTC CACGACTGGC TGCTGCGGTG GTTCAATCCG
CGCCCCGCGA TGCTCGGGCC GAGTGCAGAG GACCGGGAGC GCTTCTACGC GCTGGCGCGC
TACCCCGACG AGACCGAGGA AGGCGAAATC GAGCTGGCGA GCGGGCGGGA TTTCAGCCAG
CGGTTGTTCT TCGGCCAGCC ACGCTCCGAC GTGGAGCACG GCACCTGGTA CTTCGACGGC
ATGCCGCACC GTGTGCTGAT CACCGACCGG CTCCGCATGC CGCCCGCCAC GGGTCACCTG
ACGGGCGAAA CCCGCAAGGG CGATGCGATC AACACCCTGT TCGACCAGAT GCCGGAAGAC
ACCTTGATGT GTCTCACCAT GGTCGCCACA CCGCAGGATG TGCTGGAAGC GGACTTGAAC
CACCTGGCGA AGAAGGCCGT GGGCGAGACG CTGGCGTCGG AGCAGACGCT CAAGGACGTG
CAGGAGGCGC GGTCCCTGAT CGGCAGCGCG CACAAGCTCT ACCGGGGAAC GCTGGCGTTC
TACCTGCGCG GGCGCGACGA GGCGGAACTG GACCGGCGCG GCCTGGACCT GGCGAACGTG
ATGCTCAACG CCGGCTTGCA GCCGGTGCGC GAGGACGACG AGGTGGCGCC ACTCAACAGC
TACTTGCGCT GGCTGCCGTG CTGCTACAAC CCCGGCCAGG ATCGGCGCAG GTGGTACACC
CAACTGATGT TCGCGCAGCA CATCGCGAAC GTATCGCCGG TGTGGGGCCG CGCCCAGGGT
ACCGGGCATC CCGGCATCAC CGTGTTCAAC CGCGGCGGCG GCCCGATCAC GTTCGATCCG
CTCAACCGCC TAGACCGACA GATGAACGCC CACTTGTTCC TGTTCGGCCC CACCGGCTCC
GGCAAGAGCG CCACGCTCAA CAACCTATTG AATCAGGTCA CGGCCATCTA CCGGCCAAGG
CTGTTCATCG TGGAAGCCGG CAACAGCTTC GGCCTGTTCA GCGACTTCGC CAAGCGCCTG
GGCCTGACCG TGAACCGGGT CAAGCTGGCC CCCGGCTCGG GCATCAGCCT GGCCCCCTTC
GCCGACGCGC GCCGGCTGAT CGAGACGCCC AGCGACGTGC AGACGCTCGA TGCCGATGCG
CTGGACGAAG ACCTGCCACC GGATGTCGCG GCGATGGAGG CAGACGAGCA GCGCGACGTG
CTGGGCGAAC TGGAGATCAC GGCACGGCTG ATGATCACGG GCGGCGAAGA CAAGGAAGAA
GCGCGGATGA CGCGGGCCGA CCGCTCGCTG ATCCGCCAGT GCATCCTCGA CGCCGCCGAA
CATTGCGTGG CGGAGAAGCG CACCGTGCTC ACGCGCGATG TGCGCAATGC ACTGCGCACC
CGTGGCCAGG ACCCGACGTT GCCCGAGATG CGCCGTGCGC GGCTGCTGGA GATGGCGGAC
GCGATGGACA TGTTCTGCCA AGGCACGGAC GGCGAGATGT TCGACCGCGA CGGCACGCCG
TGGCCCGAGG CCGACATCAC GCTGGTCGAT CTGGCGACCT ATGCCCGCGA GGGCTACAAC
GCGCAGCTCT CCATCGCCTA CATCAGCCTG ATCAGCACGG TGAACAACAT CGCCGAGCGC
GACCAGTACC TGGGACGGCC GATCGTCAAC GTGACCGACG AAGGTCACAT CATCACCAAG
AACCCGCTGC TCGCGCCCTA CGTCGTGAAA ATTACAAAAA TGTGGCGCAA GTTGGGCGCC
TGGTTCTGGC TGGCGACGCA GAACATCGAC GACCTGCCAC GTGCAGCGGA GCCGATGCTC
AACATGATCG AGTGGTGGGT GTGCCTGTCG ATGCCGCCGG ACGAGGTGGA GAAGATCGCG
CGCTTCCGCG AACTCTCGCC GGCGCAGAAG GCGCTGATGC TCTCCGCACG CAAGGAAGCG
GGCAAGTTCA CCGAGGGCGT CATCCTCTCC AAGAGCATGG AAGTGCTGTT CCGCGCCGTG
CCGCCAAGTC TCTACCTCGC GCTCGCGCAA ACCGAGCCCG AGGAGAAGGC AGAACGCTAC
CAACTCATGC AGCAGCACGG CGTCAGCGAG CTGGATGCCG CCTTCAAGGT GGCTGAGAAG
ATCGACCGGG CACGTGGCAT CGAGTCGCCG GCCTTGGAAC TGTCGTAA
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| Protein sequence | MRWKLPWPKL AASSASDDEQ PDGWQRHVDA LRQAGIPEPG AAVQGRRPAT VADEQALYDV
APSFAELLPW VEFLPQSKSM LLEDGQSVAA FYELVPLGTE GREPGWLAHA RDALENALQD
SFDELDENPW VLQLYAQDEP SFDQYMQTLR DYVQPRARDT AFTEFYLRFF GHHLRAVAKP
GGLFEDTVVT RLRWRGQTRR VRMVIYRRAT GQASRRGQTP EQMLNIVCDR LCGGLANAGI
QARRMVAADV HDWLLRWFNP RPAMLGPSAE DRERFYALAR YPDETEEGEI ELASGRDFSQ
RLFFGQPRSD VEHGTWYFDG MPHRVLITDR LRMPPATGHL TGETRKGDAI NTLFDQMPED
TLMCLTMVAT PQDVLEADLN HLAKKAVGET LASEQTLKDV QEARSLIGSA HKLYRGTLAF
YLRGRDEAEL DRRGLDLANV MLNAGLQPVR EDDEVAPLNS YLRWLPCCYN PGQDRRRWYT
QLMFAQHIAN VSPVWGRAQG TGHPGITVFN RGGGPITFDP LNRLDRQMNA HLFLFGPTGS
GKSATLNNLL NQVTAIYRPR LFIVEAGNSF GLFSDFAKRL GLTVNRVKLA PGSGISLAPF
ADARRLIETP SDVQTLDADA LDEDLPPDVA AMEADEQRDV LGELEITARL MITGGEDKEE
ARMTRADRSL IRQCILDAAE HCVAEKRTVL TRDVRNALRT RGQDPTLPEM RRARLLEMAD
AMDMFCQGTD GEMFDRDGTP WPEADITLVD LATYAREGYN AQLSIAYISL ISTVNNIAER
DQYLGRPIVN VTDEGHIITK NPLLAPYVVK ITKMWRKLGA WFWLATQNID DLPRAAEPML
NMIEWWVCLS MPPDEVEKIA RFRELSPAQK ALMLSARKEA GKFTEGVILS KSMEVLFRAV
PPSLYLALAQ TEPEEKAERY QLMQQHGVSE LDAAFKVAEK IDRARGIESP ALELS
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