| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1311 |
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| Symbol | |
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| ID | 4673832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1378380 |
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| End bp | 1380392 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639838423 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_985607 |
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| Protein GI | 121593711 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.617817 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.472468 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCTGT TTCTGTGCGA GAAGCCCTCC CAGGGCAAAG ACATCGGCCG GATTCTCGGC
GCCACGCAGC GCGGTGAAGG CTGCCTCAAC GGCTCCGGCG TCACGGTCAC CTGGTGCATC
GGCCATCTCG TCGAAGCGGC AGCACCCGAG GTCTATGACG CGGCGCTCAA GCGCTGGTCG
TTGGAGCAGT TGCCCATCAT CCCTCAGCAG TGGCGGGTCG AGGTCAAACC GCAGACCGCC
ACGCAATTCA AGGTCGTAAA AACGCTTCTG GCGAAGGCGA CCCATCTCGT CATTGCCACC
GATGCCGACC GCGAGGGTGA ACTGATCGCC CGCGAGATCA TCGACCTGTG CGGATACCGC
GGCCCCATAG CACGCCTGTG GCTGTCGGCG CTCAACGATG CGTCCATCCG CACCGCGCTC
GCCAAGCTGC GGCCCTCGGC CGAGACGCTG CCGATGTATT ACTCGGCGCT GGCGCGCTCG
CGCGCCGACT GGCTCGTCGG CATGAACCTC AGCCGGCTGT TCACCGTGCT CGGGCGGCAG
GCCGGCTACG ACGGCGTGCT GTCGGTCGGG CGTGTACAGA CCCCGACGCT CAAACTCGTG
GTGGACCGCG ACCGAGAGAT CGCGGCCTTC GTGTCCGTGC CGTACTGGGC CATCGACGTG
TCCCTGTCCG CAGGCGGTCA GACGTTCACC GCGCAGTGGG TGGCACCCGA CGCCAGCACC
GACGACGCCG GCCGCTGCCT GCAGCAGCCC GTCGCACAGC AGGCCGCGCA ACAGATCCGC
GCCGCGGGCA GTGCCCAGGT GGTGTCGGTC GAGACCGAGC GCGTGCGCGA AGGCCCGCCG
CTGCTGTTCG ACCTGGGCAC CTTGCAGGAA GTCTGTTCCA AGCAGCTTGG GCTGGACGTG
CAGGAAACCT TGGAGATCGC CCAGGCTCTG TACGAGACGC ACAAGGCCAC GACGTACCCG
CGCTCGGATT CGGGCTACCT GCCCGAAAGC ATGTTCGCCG AGGTGCCCAC GGTCCTGGAC
AGCCTGCTCA AGACCGATCC CACGCTGGCC CCGATCATGG GCCAGCTCGA CCGCGCCCAG
CGCTCGCGCG CCTGGAACGA CAGCAAGGTG ACGGCGCACC ACGGCATCAT CCCGACGCTC
GAACCCGCGA ACCTCTCCGC CATGAGCGAG AAGGAGCAGG CGGTGTACCG GCTGATCCGG
GCGCATTACC TGGCCCAGTT CCTCCCGCAC CACGAGTTCG ACCGCACGAT CGCCGAGCTG
TCCTGCGGCC AGCAGAAGCT GGTGGCCACC GGAAAGCAGG TGGCCGCCCA GGGTTGGCAC
CTGGTGCTGG CCGAGCCGCA AGCGGACGAG GACGGGGAAA CCATCGCGCG CAGCCAGGTA
CTCCCCGCGC TGCGCGAGGG CCTGGCATGC CAAGTGGCCG AGGCCGAAGT CAAGGCGCTC
AAGACGCTGC CTCCGAAGCC CTACACGCAG GGCGAACTGG TCAAGTCGAT GAAAGGCGTG
GCGCGCTTCG TGACCGACCC GCGCCTGAAG CAGAAGTTGA AGGACACGAC GGGCATTGGC
ACCGAAGCCA CGCGCGCCAA CATCATCACC GGCCTGCTGA CGCGGGGCTA TCTCGTGAAG
AAAGGACGCT CCATTCGCGC ATCGGATGCG GCGCTCACGC TGATAGACGC CGTGCCCGCG
GCGATTGCCG ACCCCGGAAC CACCGCCGTG TGGGAGCAGG CGCTGGACAT GATCGAGGCC
GGACAACTCA CCCTGGATGT GTTCATCGGC AAGCAGGCCG CATGGATTTC GCAGTTGATC
GCGCAGTACG GCAGCACGTC CCTGTCCATC AAGGTGCCCC AAGGACCGGC TTGTCCGCAG
TGTGGCGCGC CCACGCGCCA ACGCACCGGC AAGAGCGGCC CGTTCTGGTC GTGCAGTCGC
TATCCCGACT GCAAAGGCAC GCTGCCGGTC GAAACCGGCA CGTCCAAGCG TGGTGCCTCG
CGCCCACGCA AGAGCGGCCG CAAAGGCTCC TGA
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| Protein sequence | MRLFLCEKPS QGKDIGRILG ATQRGEGCLN GSGVTVTWCI GHLVEAAAPE VYDAALKRWS
LEQLPIIPQQ WRVEVKPQTA TQFKVVKTLL AKATHLVIAT DADREGELIA REIIDLCGYR
GPIARLWLSA LNDASIRTAL AKLRPSAETL PMYYSALARS RADWLVGMNL SRLFTVLGRQ
AGYDGVLSVG RVQTPTLKLV VDRDREIAAF VSVPYWAIDV SLSAGGQTFT AQWVAPDAST
DDAGRCLQQP VAQQAAQQIR AAGSAQVVSV ETERVREGPP LLFDLGTLQE VCSKQLGLDV
QETLEIAQAL YETHKATTYP RSDSGYLPES MFAEVPTVLD SLLKTDPTLA PIMGQLDRAQ
RSRAWNDSKV TAHHGIIPTL EPANLSAMSE KEQAVYRLIR AHYLAQFLPH HEFDRTIAEL
SCGQQKLVAT GKQVAAQGWH LVLAEPQADE DGETIARSQV LPALREGLAC QVAEAEVKAL
KTLPPKPYTQ GELVKSMKGV ARFVTDPRLK QKLKDTTGIG TEATRANIIT GLLTRGYLVK
KGRSIRASDA ALTLIDAVPA AIADPGTTAV WEQALDMIEA GQLTLDVFIG KQAAWISQLI
AQYGSTSLSI KVPQGPACPQ CGAPTRQRTG KSGPFWSCSR YPDCKGTLPV ETGTSKRGAS
RPRKSGRKGS
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