| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1285 |
|---|
| Symbol | |
|---|
| ID | 4673438 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 1357990 |
|---|
| End bp | 1360269 |
|---|
| Gene Length | 2280 bp |
|---|
| Protein Length | 759 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639838401 |
|---|
| Product | helicase domain-containing protein |
|---|
| Protein accession | YP_985585 |
|---|
| Protein GI | 121593689 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCTCG ATCTCGAAAC CACCGCCGCT GAAGCCACGC CCGTACAGGG CGAACTGCTC
GATGCGGAAT CTTCCCCTCT GACCCTGAGC CTTCAGGATT TTGTCGGCGA GTTCGGCGAC
GAACTACTCG ACGCCCTCAA CAGCGCTAAT CCGCCGGTCT ATACCGGCCA ACCGCAGGCG
CACCGGCAAC TGGTGGTCGC CAGCCTCAAG CGCAAGCTGT TCCCAGCCCA GGCCGAAGTC
GTCCACGCCG CCGCCGAGCT GCTGATCGAC CGTGGCGAAC GTGCTGCGAT CGTCAATGGC
GAGATGGGCT GCGGCAAGAC GACCGTCGGC ATTGCCACGG CCGCCGTGCT CAACGCCGAA
GGCTATCGCC GCACTCTGGT GCTGTCGCCG CCCCACCTGG TTTACAAGTG GCGGCGCGAG
ATCCAGGAGA CGGTGGCCGG TGCCAAGGTG TGGGTACTCA ACGGGCCGGA TACGCTCGTC
AAGCTCATCA AGCTGCGCGA GCAGTTGGGC GTGCAGCCCA CGGGCCAGGA GTTCTTCGTC
CTGGGGCGCG TCAGGATGCG GATGGGCTTT CACTGGAAGC CTGTCTTCAC CACGCGGCGC
ACCCGCCACG GCGACGTGGC GGCCTGCCCG GACTGCGGCA CGGTCATCAC CGACCTCGAC
GGCGAGCCGG TCAACCCGAT CGCGCTCCAA GCCGAGGAGT GCCGCAGGAA GTGCGGCCAC
TGCGCCGCGC CCCTGTGGAC ACTGATCCGC CCGCGCAGTC TGTCCGGCAG CGACCAGTCC
TCGGCCGTGC TGAAAGCCTT GAAGCGCATA CCGACCATCG GAGAGGTCAC CGCGCAGAAG
CTGATGCAAA AGTTCGGTGA CGGGTTCCTG GCGTCGATGC TCGGCGACAA CATCCATGAG
TTCATCAACC TCATGGATGG CAACGGCGAG CTGGTGTTTT CCGACCGTCA GGCCACGCGC
ATGGAACGTG CGATGGCCAA CATGGAGTTC GGCTTTGGCG AGGGCGGCTA TCAGCCGTCC
GAGTTCATCA AACGCTACCT GCCGCAAGGC ACGTTCGACC TGCTCATCGC CGATGAGGCA
CATGAGTACA AGAACGGGGG CAGTGCCCAG GGCCAGGCCA TGGGCGTGCT GGCGGCGAAG
GCTCGCAAGA CCTTGCTGCT GACCGGCACG CTGATGGGCG GCTACGGCGA CGACCTCTTT
TATCTGCTGT TCCGCGCCCT TCCCGGGCGG ATGATCGAAG ACGGATATCG CCCGACCACG
AGCGGCAGCA TGACCTCGGC CGCGATGGCG TTCATGCGCG ATCACGGTGT CTTGAAGGAC
ATCTACTCCG AGAGCACCGG CACGGCGCAC AAGACGGCCA AGGGCACCAA GGTATCGGTG
CGCACGGTCA AGGCCCCGGG CTTCGGCCCC AAGGGCGTCT TGCGCTGCAT CCTGCCGTTC
ACGATCTTCC TCAAACTCAA GGACATCGGC GGCAACGTTC TGCCGCCGTA TGACGAAGAG
TTCCGTGAAG TCGCGATGGA CGTGGCGCAA GCTGCGGCCT ACCGCGATCT GGCGGGTCGG
CTGACCGCGG AGCTGAAACA GGCTCTGGCG CGACGCGATA CGACCTTGCT GGGTGTGGTC
CTCAACGTGC TGCTGGCCTG GCCGGATTGC TGCTTCCGGT CGGAGACCGT GGTGCATCCG
CGCACGCGCA ACACCTTGGC GTTTGTCCCG GCTCAGTTCA ACGAGTTCGA GATCAGCCCC
AAGGAGCGTG AGCTGATCGA GATCTGCAAG GAAGAGAAGG CCCAGGGCCG CAAGGTCCTG
GCCTACACGG TCTATACCGG CACACGCGAC ACGACCAGCC GGTTGAAGGT GCTGCTGGAG
CAGGAAGGTT TTCGGGTGGC GGTGCTGCGC GCAAGCGTGG ATGCCAGCCG TCGCGAAGAC
TGGATTGCGG AGCAACTGGA TCGTGGCATC GACGTGCTCA TCACCAATCC CGAATTGGTC
AAGACGGGGT TGGACCTGTT GGAGTTTCCG ACGATCGTGT TCATGCAGTC GGGCTACAAC
GTGTATTCGC TTCAGCAGGC AGCACGCCGC TCCTGGCGCA TCGGGCAGAA GCAGCCGGTG
CGCGTGATCT ACCTCGGCTA CTCCGGTTCC TCGCAGATGA CCTGCCTGGA GCTGATGGCC
AAGAAGATCA TGGTCTCGCA GTCCACCTCG GGCGACGTGC CCGAATCCGG GCTGGATGTA
CTCAACCAGG ACGGTGATTC CGTCGAGGTC GCACTGGCCC GGCAATTGGT CGCCGCCTGA
|
|---|
| Protein sequence | MSLDLETTAA EATPVQGELL DAESSPLTLS LQDFVGEFGD ELLDALNSAN PPVYTGQPQA
HRQLVVASLK RKLFPAQAEV VHAAAELLID RGERAAIVNG EMGCGKTTVG IATAAVLNAE
GYRRTLVLSP PHLVYKWRRE IQETVAGAKV WVLNGPDTLV KLIKLREQLG VQPTGQEFFV
LGRVRMRMGF HWKPVFTTRR TRHGDVAACP DCGTVITDLD GEPVNPIALQ AEECRRKCGH
CAAPLWTLIR PRSLSGSDQS SAVLKALKRI PTIGEVTAQK LMQKFGDGFL ASMLGDNIHE
FINLMDGNGE LVFSDRQATR MERAMANMEF GFGEGGYQPS EFIKRYLPQG TFDLLIADEA
HEYKNGGSAQ GQAMGVLAAK ARKTLLLTGT LMGGYGDDLF YLLFRALPGR MIEDGYRPTT
SGSMTSAAMA FMRDHGVLKD IYSESTGTAH KTAKGTKVSV RTVKAPGFGP KGVLRCILPF
TIFLKLKDIG GNVLPPYDEE FREVAMDVAQ AAAYRDLAGR LTAELKQALA RRDTTLLGVV
LNVLLAWPDC CFRSETVVHP RTRNTLAFVP AQFNEFEISP KERELIEICK EEKAQGRKVL
AYTVYTGTRD TTSRLKVLLE QEGFRVAVLR ASVDASRRED WIAEQLDRGI DVLITNPELV
KTGLDLLEFP TIVFMQSGYN VYSLQQAARR SWRIGQKQPV RVIYLGYSGS SQMTCLELMA
KKIMVSQSTS GDVPESGLDV LNQDGDSVEV ALARQLVAA
|
|---|
| |