| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1232 |
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| Symbol | |
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| ID | 4673885 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1308007 |
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| End bp | 1311126 |
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| Gene Length | 3120 bp |
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| Protein Length | 1039 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639838351 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_985535 |
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| Protein GI | 121593639 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.99301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCCA AGCTGATTCG ATGGTCGGTG GCCAATCGCT TCCTGGTGCT GCTGGCCACC
GCCATGCTCA CGGCATGGGG CGTGTGGGGC GTTCGCAGCA CGCCCGTGGA TGCGCTGCCG
GACTTGTCAG ACGTGCAGGT CATCATTCGC ACCAACTACC CAGGACAGGC GCCGCAGATC
GTCGAGAACC AGGTCACCTA CCCGTTGGCC ACCACCATGC TGTCGGTGCC AGGGGCCAAG
ACCGTGCGCG GCTTCTCGTT CTTTGGCGAC TCGTTCGTCT ATGTCTTGTT CGAGGACGGA
ACCGACCTGT ACTGGGCCCG CTCACGGGTA CTGGAATACC TGAACCAGGT CCAGGGCCGA
TTGCCCGCCA CGGCGAAGCC GGCCCTGGGT CCGGACGCCA CAGGCGTCGG CTGGATCTTC
CAGTACGCGC TCGTGGATCG CACGGGCAAG AACGATCTGG CGCAACTGCG TGCGTTGCAG
GACTGGTTCC TGAAGTTCGA ACTCAAGAGC CTGCCCAACG TGGCCGAGGT GGCATCGGTG
GGGGGCATGG TCAAGCAGTA CCAGGTCGTG CTCGACCCGA TCAAGTTGGC GTCCTATGGC
CTCAGTCAGG CTCAAGTCCG CGATGCCCTG ATGGCGGCCA ACCAGGAGAC CGGCGGCTCC
GTCCTGGAAT TGTCAGGCGC GGAGTACATG GTCCGCGCGA GCGGATACCT CAAGACCCTG
GACGAGTTCC GGGAGATCCC CTTGACGGCA CGCGGCGGTG TGCCGGTGCG GCTGGGGGAT
GTGGCGATGC TCCAGATAGG CCCGGAGATG CGGCGTGGCA TTGCGGAACT CGACGGAGAA
GGCGAGGTCG CCGGCGGCGT GGTGGTGCTG CGCTCCGGCA AGAATGCCCA GGAGACGATC
GCTGCCGTCA AGGCCAAGCT GGCGGAGCTG CAGGGCAGCC TGCCGCCGGG CGTCGAGATC
GTCACCACCT ACGACCGCAG CGCGCTGATC GAGCGGGCCA TTCGCAATCT CACGACCAAG
CTGGGCGAAG AGTTTCTGGT GGTGGCGCTG GTCTGCGCAC TGTTCCTTTG GCATCTTCGT
TCTGCGCTGG TGGCCATCAT CTCGCTACCT CTGGGCGTGA TGACGGCGTT CCTGGTCATG
CGCTACCAGG GCATCAACGC CAACATCATG TCGCTGGGGG GGATTGCCAT CGCCGTGGGG
GCGATGGTGG ATGCAGCGGT GGTGATGATC GAGAACGCCC ACAAGAAGCT GGAGGCTTGG
CAGCACGCGC ACCCGAATCA ACGACTGCAG GGCAAGGAAC GGTGGGACGT GATCACACAG
GCCGCGGAGG AAGTCGGTCC TGCGCTCTTC TTCTCGCTGC TCATCATCAC GCTCTCGTTC
ATCCCGGTCT TCACCCTAGA AGCGCAGGAA GGCCGGCTGT TCGGCCCGCT GGCATTCACC
AAGACCTACG CGATGCCTGC GGCCGCAGGG CTGTCGGTGA CGCTGATTCC CGTACTCATG
GGCTACTGGA TTCGCGGGCG TATCCCAGAT GAGCAGAAGA ACCCCATTAC CCGCATCCTG
ATTGCAGCCT ACCGGCCAGC ACTGGAGTGG GTACTGCGCC GGCCCAAGGC GACGCTGCTG
ATCGCCGTGC TGGCCTTGGC GACCACGGCC TGGCCCTTGG CGCGGCTCGG CGGTGAGTTT
CTGCCGAGGT TGGACGAAGG GGACCTGCTC TACATGCCCT CGGCCCTGCC GGGACTCTCG
GCGCAGCGCG CCACGGAGTT GCTGCAGCTG AGCAACCGCA TGATCAAGAC CGTACCTGAA
GTGGACAAGG TGTTCGGCAA GGCAGGACGG GCCGAAACTG CGACCGATCC GGCGCCCCTG
GAGATGTTCG AGACCACGGT GAAGCTCAAG CCCAGGGAAC AATGGCGTCC AGGCATGACG
CCCGAGAAGC TCGTGGAAGA GCTGGATCGT GCCGTGAAGA TCCCGGGCCT GTCCAATATA
TGGATTCCCC CTATCCGCAA TCGCATCGAT ATGCTGGCTA CCGGCATCAA GAGCCCGATC
GGGGTGAAGG TGACTGGCAA CGACCTGGGC GTGATCGATC GCATCGCTGC AGAGGTCGAG
CAGGTCGCCA AGGGCATTCC CGGCGTGACG TCATCACTCG CGGAGCGCTT GACGGGCGGG
CGCTACGTGG ATGTTCAGAT CGATCGCGTA GCCGCCGGTC GCTACGGCCT GAACATCGCC
GATATCCAGG CGGTCATCGC CGGCGCGGTG GGTGGCGAAA ACGTCTCGGA GACGGTCGAG
GGGCTTGCCC GCTTTCCGAT CAATCTGCGC TACGCGCGAG AATGGCGTGA TTCACCACAA
CGGCTGGCAG AACTCCCCAT CTTCACGCCG ATGGGTCAGC AGATTACGTT GGGGACCGTG
GCACGCATCG CGATCACCGA TGGGCCGCCC ATGCTCAAGA GCGAGAACGC ACGGCCCTCC
GGTTGGGTCT ATGTCGATGT GCGCGGCCGT GATCTAGCCT CGGTGGCCAA TGAACTGCGC
GATGCCATCG GGCAGCAGGT CAAGCTGGAG CCGGGTGTGA GCATCACCTA CTCCGGGCAG
TTCGAATACA TGGAGCGGGC CAATGCACGC CTGAAGGTTG TGGAGCCTGC CACCCTGTTG
ATCATCTTCG TTCTGTTGTA CCTGACCTTC GCGCGTGTGG ACGAAGCGGG CTTGATCATG
GCGACTTTGC CCTTCGCGCT CACGGGGGGC ATCTGGTTCC TGTACCTGCT GAATTACAAC
CTGTCCATCG CCACCGGCGT GGGATTCATC GCGCTGGCAG GTGTGGCGGC GGAGTTCGGC
GTGGTGATGC TCATCTATCT GAAGCAGGCC TTGGCGGAAC GTTGCCCCGA TGGACGCGAA
CCGACGCGAG AAGAACTGCT CGATGCGATC CGGGAAGGGG CGGTGCTGCG CGTGCGCCCA
AAAGCGATGA CCGTTGCGGT CATCCTGGCG GGCCTGGTAC CCATTGTTTG GAGCAGCGGC
ACGGGCTCTG AAGTCATGAG CCGCATAGCA GCCCCGATGC TCGGCGGGAT GGTGACCGCA
CCGTTGCTGT CGCTGTTCGT GATTCCGGCT GCCTACCTGC TGATGCGTAA GCCACGCTAA
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| Protein sequence | MIAKLIRWSV ANRFLVLLAT AMLTAWGVWG VRSTPVDALP DLSDVQVIIR TNYPGQAPQI
VENQVTYPLA TTMLSVPGAK TVRGFSFFGD SFVYVLFEDG TDLYWARSRV LEYLNQVQGR
LPATAKPALG PDATGVGWIF QYALVDRTGK NDLAQLRALQ DWFLKFELKS LPNVAEVASV
GGMVKQYQVV LDPIKLASYG LSQAQVRDAL MAANQETGGS VLELSGAEYM VRASGYLKTL
DEFREIPLTA RGGVPVRLGD VAMLQIGPEM RRGIAELDGE GEVAGGVVVL RSGKNAQETI
AAVKAKLAEL QGSLPPGVEI VTTYDRSALI ERAIRNLTTK LGEEFLVVAL VCALFLWHLR
SALVAIISLP LGVMTAFLVM RYQGINANIM SLGGIAIAVG AMVDAAVVMI ENAHKKLEAW
QHAHPNQRLQ GKERWDVITQ AAEEVGPALF FSLLIITLSF IPVFTLEAQE GRLFGPLAFT
KTYAMPAAAG LSVTLIPVLM GYWIRGRIPD EQKNPITRIL IAAYRPALEW VLRRPKATLL
IAVLALATTA WPLARLGGEF LPRLDEGDLL YMPSALPGLS AQRATELLQL SNRMIKTVPE
VDKVFGKAGR AETATDPAPL EMFETTVKLK PREQWRPGMT PEKLVEELDR AVKIPGLSNI
WIPPIRNRID MLATGIKSPI GVKVTGNDLG VIDRIAAEVE QVAKGIPGVT SSLAERLTGG
RYVDVQIDRV AAGRYGLNIA DIQAVIAGAV GGENVSETVE GLARFPINLR YAREWRDSPQ
RLAELPIFTP MGQQITLGTV ARIAITDGPP MLKSENARPS GWVYVDVRGR DLASVANELR
DAIGQQVKLE PGVSITYSGQ FEYMERANAR LKVVEPATLL IIFVLLYLTF ARVDEAGLIM
ATLPFALTGG IWFLYLLNYN LSIATGVGFI ALAGVAAEFG VVMLIYLKQA LAERCPDGRE
PTREELLDAI REGAVLRVRP KAMTVAVILA GLVPIVWSSG TGSEVMSRIA APMLGGMVTA
PLLSLFVIPA AYLLMRKPR
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