Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1206 |
Symbol | |
ID | 4671994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 1277117 |
End bp | 1278274 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639838328 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_985514 |
Protein GI | 121593618 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.427148 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCACC CTGTCGCACA GCGCGCCGCG GGCCTGCCGG GCCCGTCTTC ATTGCAACCC CGCCGCGGGG TTTTTTTGTG GCCGCCGCGT GGCGGCGTGG CGGGTGCTGC ACTGGTGCTG GCCGTGGCTG CCTTGGCGCT GGCGGGATGC TCGCGCCGCG AGCCGGCGCC AGAGCCGGTG CGCGCGGTGA AACTGCTCAC CGTCGGCGTG GCGCCCCTGC AGATGCGCCT GGAATACGCG GGCGAAGTGC GCGCGCGCGT GGAATCGCGC CTGGGTTTTC GCGTGGCCGG CAAGATCGTG CAGCGCCAGG CCGAGCTGGG CCAGCGCGTG CAGGCCGGCC AGGTGTTGGC GCAGCTGGAT CCGCGCGACT ATGAGCTGGC TGCGCAGGCC GCGCGCGCCC AGGTGGCGTC CGCCACCACG CAGCGTGATT TGGCCGCGGC GGATTTCGAG CGCTTTTCCA AGCTGCGCGC GCAGAACTTC ATCAGCGGGG CGGAGCTGGA CCGCCGCCAG GCTCAGCTGA AGGCCGCGCA GGCTTCGCTG GACCAGGCGC GCGCGCAGCT CGCTTCCCAG GGCAACCAGA CCGAGTACAC GCGCCTGGTG GCGGATGCGC CGGGGGTGGT GACGTCGGTT GACGCCGAGC CCGGCCAGGT GGTGTCTGCG GGCACGCCGG TGGTGCGCAT TGCTCGCGAC GGCCCGCGCG ACGCGGTGTT CTCGGTGCCG GAGGACAAGG TGGGCCAGTT GCGCGCAGGG CAGGCCGTGC AGGTGCGCGC CTGGTCGGGC GACGCGCTGC TGCAGGGCCG GGTGCGCGAG GTGGCGGCCA GCGCCGATCC GGTGACGCGC ACCTTCCTCG TGAAAGTGGC GGTGGAGGGC GCGGACGTGC CGCCGCTGGG CGCCACCGTG TATGTGGCGC CGCAGGTGCT GGCGCGGGGC GGCGTGCAGG CGATCAAGCT GCCCACCAGC GCCCTGCGCC AGGAGGGCGG CCAGACGGTG GTGTGGGTCT ATGAGGCCAA GAACGGCAGT GCCACCGGCA CCGTGCGCCT GCAGCCGGTG CAGATCGCCA CGGCCGACGG CAACGAGGCC GTGATCGCCG CCGGCCTCAC CCCCGGCATG CAGGTGGTGG CCACGGGCGT GCATGTGCTG CCCCGGGGCA GGTGGTGA
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Protein sequence | MTHPVAQRAA GLPGPSSLQP RRGVFLWPPR GGVAGAALVL AVAALALAGC SRREPAPEPV RAVKLLTVGV APLQMRLEYA GEVRARVESR LGFRVAGKIV QRQAELGQRV QAGQVLAQLD PRDYELAAQA ARAQVASATT QRDLAAADFE RFSKLRAQNF ISGAELDRRQ AQLKAAQASL DQARAQLASQ GNQTEYTRLV ADAPGVVTSV DAEPGQVVSA GTPVVRIARD GPRDAVFSVP EDKVGQLRAG QAVQVRAWSG DALLQGRVRE VAASADPVTR TFLVKVAVEG ADVPPLGATV YVAPQVLARG GVQAIKLPTS ALRQEGGQTV VWVYEAKNGS ATGTVRLQPV QIATADGNEA VIAAGLTPGM QVVATGVHVL PRGRW
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