| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1198 |
|---|
| Symbol | |
|---|
| ID | 4672539 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 1268485 |
|---|
| End bp | 1269909 |
|---|
| Gene Length | 1425 bp |
|---|
| Protein Length | 474 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639838320 |
|---|
| Product | FAD linked oxidase domain-containing protein |
|---|
| Protein accession | YP_985506 |
|---|
| Protein GI | 121593610 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.543667 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACTG CCCTGCTCGA CACCCTGCGC CGGATCGTCG GCGCCGCCCA TGTACTGACC
GAGGGCGACC TTGCCGCCTA TGAACAGGAC TGGCGCAAGC GCTCCCATGG CAAGTCACTG
GCCGTGGTGC GCCCGGGCTC CACGGCCGAG GTGGCAGCAG TGGTGCGCGC CTGTGCCGAT
GCCGGCGTGG CGATCGTGCC GCAGGGCGGC AACACCGGCC TGTCGGTGGG CAGCACGCCC
GACGGCAGCG GCACACAGGT GGTGCTGAAC CTCACGCGCA TGAACGCGGT GCGCGCCATC
GACCGCGACA ACCTCACCAT GACGGTGGAG GCCGGCTGCA TATTGCAGGC CCTGCAGGAG
ACGGCCGAGA AAGCCGATCT GCTGTTTCCG CTGTCGCTTG CCGCAGAAGG CAGTTGCACC
ATCGGCGGCA ACCTGTCCAC CAATGCCGGC GGCACGCAGG TGGTGCGCTA CGGCAACACG
CGCGAGCTGT GCCTGGGCCT GGAGGTGGTT ACGCCCCGGG GCGAGGTGTG GAACGGCCTC
TCGGGCCTGC GCAAGGACAA CACCGGCTAC GACCTGCGCG ACCTGTACAT CGGCAGCGAA
GGCACGCTCG GCATCATCAC CGCGGCCACC ATGAAGCTCT TCCCCCAGCC CGCTGCGCAG
CTCACCGCCT GGGCCGCCGT GCCGTCGATG GGGGCGGCCG TGCGCCTGCT GGGCCTGTCG
CACCAGCACC TGGGGGCCGG GCTCACGGGT TTCGAGGTGA TGGGGCAGTT CGCGCTGTCG
CTGGTCATCA AGCACATGCC GCAGCTGCGC GTGCCGTTCG CCGGGCTGGA CGGCGCGCCA
CCCTACTACG TGCTGCTGGA AAACAGCGAC AGCGAATCCG AAGAACACGC GCGCCAGCGC
TTCGAGGCGC TGCTGGAACT GGCCTTCGAG GACGGCTGCG TGCTGGACGC CGTGGTCGCC
GAGAGCCTGT CGCAAGCGCA TGAGCTGTGG CATATCCGCG AGAGCATTCC GCTGGCCCAG
GCCGAAGAAG GCCTGAACAT CAAGCACGAC ATTTCGATCG CCGCGTCGCG CATCCCCGCG
TTCGTGGAGC ACACCGATGC GCTGCTGCAG CGCGAGATTC CCGGCGTGCG CCTGGTCAAC
TTCGGCCACC TGGGCGACGG CAATCTGCAC TACAACGTAC AGGCGCCGGC GGGCGGCGAT
GCGCGGGAGT TCCTGCGCAC GCAGGAGGAC CGCGTCAACG CCCTGGTGTA CGACGCGGTG
GCGCAGTTCG ACGGCTCGTT CTCGGCCGAG CACGGCGTGG GCGTGCTCAA GGCCGACAAG
CTGGCGCAGT ACAAGTCGCC CGTGGCCCTG GGGCTGATGC GCGCCATCAA GCAGGCCCTG
GACCCGCAGG GCCTCATGAA CCCGGGCTGC ATTCTTCAAA AATGA
|
|---|
| Protein sequence | MTTALLDTLR RIVGAAHVLT EGDLAAYEQD WRKRSHGKSL AVVRPGSTAE VAAVVRACAD
AGVAIVPQGG NTGLSVGSTP DGSGTQVVLN LTRMNAVRAI DRDNLTMTVE AGCILQALQE
TAEKADLLFP LSLAAEGSCT IGGNLSTNAG GTQVVRYGNT RELCLGLEVV TPRGEVWNGL
SGLRKDNTGY DLRDLYIGSE GTLGIITAAT MKLFPQPAAQ LTAWAAVPSM GAAVRLLGLS
HQHLGAGLTG FEVMGQFALS LVIKHMPQLR VPFAGLDGAP PYYVLLENSD SESEEHARQR
FEALLELAFE DGCVLDAVVA ESLSQAHELW HIRESIPLAQ AEEGLNIKHD ISIAASRIPA
FVEHTDALLQ REIPGVRLVN FGHLGDGNLH YNVQAPAGGD AREFLRTQED RVNALVYDAV
AQFDGSFSAE HGVGVLKADK LAQYKSPVAL GLMRAIKQAL DPQGLMNPGC ILQK
|
|---|
| |