| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1178 |
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| Symbol | |
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| ID | 4672414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1243761 |
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| End bp | 1244666 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639838295 |
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| Product | HflC protein |
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| Protein accession | YP_985486 |
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| Protein GI | 121593590 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | [TIGR01932] HflC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.7077 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACAGAA TCGGATTTAT CGCATCGACA GTTCTGTTGT TGCTGGCATT GTTCAGCTCG
ATGGTGTTCG TCGTCGACCA ACGCCAGTTT GGCGTGGTGT ACGCGTTGGG GCAGATCAAG
GAAGTCATCA CGGAACCAGG CTTGAATTTC AAGCTACCCC CACCTTTCCA AAACGTTCGC
TACATCGACA AGCGTCTGCT CACGCTGGAC AGTTCAGACA CCGAGTCGAT GCTGACAGCC
GAGAAGCAGC GCGTGGTGAT CGATTGGTAT GTGCGCTGGC GCATTACCGA CCCATCCGAG
TACATCCGCA ATGTGGGACT GGACGAGAAC GCAGGTGCAC TGCAGCTCAA TCGGGTGGTC
CGCAATGCAT TTCAGGAAGA AGTCAACCGT CGCACCGTCA AGGAGCTGCT GTCGCTCAAG
CGCGATGCGC TGATGTCCGA CGTGAAACGG GAAGTGCTGG AGGCTGTCCG CGGCTCTAAG
CCTTGGGGTG TCGATGTCGT GGACGTGCGC ATCACGCGGG TCGACTACGT AGAAGCGATC
ACGGAGTCCG TCTATCGACG CATGGAAGCG GAACGCAAGC GCGTTGCGAA TGAACTGCGC
TCCACGGGCG CGGCGGAGGG GGAGAAGATT CGCGCAGACG CAGACCGGCA GCGCGAGATC
ACCATTGCCA ATGCCTACCG CGACGCACAG AAGATCAAGG GCGAGGGTGA TGCGGAAGCT
GCGCGTCTGT ATGCGGAGGC ATTCGGCCGT GATCCACAAT TTGCACAGTT CTACCGGAGT
CTCGAAGCTT ACAAGGCGAG CTTCAACCGC AAGGGCGATG TCATGGTGCT GGATCCGGCG
AACACTGAAT TTTTCAAGGT ATTCAGAGGC GGGACGGGTA ACGCATCTGC GACCCCCCGC
CGCTGA
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| Protein sequence | MNRIGFIAST VLLLLALFSS MVFVVDQRQF GVVYALGQIK EVITEPGLNF KLPPPFQNVR
YIDKRLLTLD SSDTESMLTA EKQRVVIDWY VRWRITDPSE YIRNVGLDEN AGALQLNRVV
RNAFQEEVNR RTVKELLSLK RDALMSDVKR EVLEAVRGSK PWGVDVVDVR ITRVDYVEAI
TESVYRRMEA ERKRVANELR STGAAEGEKI RADADRQREI TIANAYRDAQ KIKGEGDAEA
ARLYAEAFGR DPQFAQFYRS LEAYKASFNR KGDVMVLDPA NTEFFKVFRG GTGNASATPR
R
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