Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1171 |
Symbol | hisS |
ID | 4672361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 1236282 |
End bp | 1237571 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639838288 |
Product | histidyl-tRNA synthetase |
Protein accession | YP_985479 |
Protein GI | 121593583 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0124] Histidyl-tRNA synthetase |
TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGAAGC TGGTTGCCAT CAAGGGCATG AACGACATTC TTCCGCCCGA TTCGGCGCGC TGGGAATGGC TGGAGGACAA AGTGCGCACC CTCATGGCGC GCTACGCTTA TCGCAACATC CGCACGCCCA TCGTCGAGCC TACGCCGCTG TTCGTGCGCG GCCTGGGCGA AGTCACCGAC ATCGTCGAGA AGGAGATGTA CTCCTTCGAG GACCGGCTCA ACGGTGAACA GCTGACGCTG CGCCCCGAGG CAACGGCGGG GGTGGTGCGT GCGGTGGTAG AGCATTCCAT GCTCTACGAC GGCGGCAAGC GCCTGTACTA CATGGGGCCG ATGTTCCGGC ATGAACGGCC ACAGCGCGGC CGCTACCGCC AGTTCCACCA GATCGGTGCC GAGGCGCTGG GCTTTCCCGG CGCGGAAGCC GATGCCGAGA TCATTCTGCT GGCGCATGCG CTGTGGGCGG AACTGGGGCT GGAGAACGTG CGGCTGGAAT TGAACAGCCT GGGGCAGCCT GACGAGCGCC GCGCCCACCG CGCGGCGCTG ATCGCATACC TGGAGCAGCA CATGGATGTG CTCGACGAGG ATGCGCGCCG CCGCCTGCAC AGCAATCCGC TGCGCATTCT CGACACCAAG AACCCCGCGA TGCAGGCGCT GGTGGAAGGC GCCCCGCGGC TCATCGACTT TCTAGGCGAG GCGTCGCTGC AGCATTTCGA GACCGTCAAG GCGATCCTGG ATGCCAACGG CGTGGTCTGG AGCCTCAACC CCCGCCTGGT CCGCGGGATG GACTATTACA ACCTCACGGT ATTCGAGTTC GTGACGGACC AACTGGGCTC GCAGGGCACG ATCTGCGGTG GGGGCCGTTA CGACTACCTG ATCGAGCAGA TCGGCGGCAA GTCCGCTCCG GCCGTGGGCT GGGCGCTGGG GGTGGAGCGC GTGCTGGAGT TGCTCAAGGA GCAGGAGGCG CAAGTGGCCC GACCAGCTGC CGATGCCTAT GCCGTAGTGC CCGACGCGTC AGCCCTGCCG GTGGTCATGG CTACCTTGCA GCGGCTGCGT GCGCAGGGGG TGTCGGTGCA GATGCACAGC TCCACCGCCG CAGGCGAGGG CATGGGCAGC ATGAAATCCC AGTTCAAGAA GGCGGACGCC AGCGGCGCAC GCTATGCACT GGTCTTCGGC GCCGACGAAC TGGCCCGCGG GGCCGTGACC GTCAAGCCGC TGCGGGATAG CGGCGAGCAG GCAGAGCGCC CGCTGGCGGC GCTGGCCGAA TGGGCGGCCA CCCTACAATC CTCGCGCTGA
|
Protein sequence | MQKLVAIKGM NDILPPDSAR WEWLEDKVRT LMARYAYRNI RTPIVEPTPL FVRGLGEVTD IVEKEMYSFE DRLNGEQLTL RPEATAGVVR AVVEHSMLYD GGKRLYYMGP MFRHERPQRG RYRQFHQIGA EALGFPGAEA DAEIILLAHA LWAELGLENV RLELNSLGQP DERRAHRAAL IAYLEQHMDV LDEDARRRLH SNPLRILDTK NPAMQALVEG APRLIDFLGE ASLQHFETVK AILDANGVVW SLNPRLVRGM DYYNLTVFEF VTDQLGSQGT ICGGGRYDYL IEQIGGKSAP AVGWALGVER VLELLKEQEA QVARPAADAY AVVPDASALP VVMATLQRLR AQGVSVQMHS STAAGEGMGS MKSQFKKADA SGARYALVFG ADELARGAVT VKPLRDSGEQ AERPLAALAE WAATLQSSR
|
| |