Gene Ajs_1167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1167 
Symbol 
ID4672272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1231962 
End bp1233086 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content61% 
IMG OID639838284 
Productradical SAM protein 
Protein accessionYP_985475 
Protein GI121593579 
COG category[R] General function prediction only 
COG ID[COG0820] Predicted Fe-S-cluster redox enzyme 
TIGRFAM ID[TIGR00048] radical SAM enzyme, Cfr family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGA ACCTTCTGGA TTTTGACCTG GACGGCCTGG CTGCTTTTTG CGAGCGGCTG 
GGAGAAAAAC GTTTTCGGGC CACGCAACTG TTTCGCTGGA TCCACCAGCG CGGTGCCAGC
GATTTTGACC AGATGAGCGA CCTGGCGAAA TCGTTGCGCG AGAAGCTCAG GGGCTGCGCC
CATGTGGCAG GGCTGCAAGC CATCAGCGAA CATGTCTCTG CGGACGGCAC GGTGAAGTGG
CTGTTCGACG TGGGCGACGG CAACGCCGTG GAGACAGTCT TTATTCCTGA GGACGATCGC
GGCACCTTGT GCATCTCCTC GCAGGCTGGA TGCGCCGTAG GCTGTCGTTT TTGCTCCACC
GGTCACCAGG GGTTCAGCCG CAATCTCACT ACTGGCGAAA TCCTGGCCCA GCTCTGGTAC
GCCGAGCACG CACTACGGCA GCGCCGCGGT GACGGTGAAC GCGTGATTTC CAACGTGGTG
ATGATGGGAA TGGGCGAGCC GCTGCAGAAC TATGCTGCAC TGGTGCCTGC GCTGCGAGTC
ATGCTCGATG ACCATGGTTA CGGCTTGTCG CGGCGTCGCG TAACCGTGTC TACCTCAGGC
GTCGTGCCCA TGATGGACCG CTTGGCGCAG GATTGTCCTG TGGCGCTCGC TGTTTCGCTG
CATGCTCCCA ATGACGTGTT GCGCGACAAC CTCGTTCCCC TGAACCGCAA GTACCCGCTG
CATGAACTCC TGGCGGCGTG TCGGCGTTAC TTGGACCACG CGCCGCGGGA CTTCATCACT
TTTGAATACT GCATGCTGGA AGGCGTGAAC GATCAGCCAG AGCATGCGCG ACAGTTGATT
GACCTGGTGG GCCGCAAGGC GGCCGACGGC GGGGTGTCGT GCAAGTTCAA TCTCATCCCC
TTCAACCCGT TCCCGGCTTC CGGTCTGCGC CGATCTCCCC CGGCGGCTGT GACGGCTTTC
GCACAATTGT TGAGTGACGC GGGTATCGTC ACGACCGTTC GCAAGACGCG CGGTGACGAT
ATTGATGCGG CATGCGGACA ACTGGCTGGC GATGTGAAGG ACCGAACACG GGTCAATGAA
CGCATGGCCA AGCTCAGGAC CATCGAGATC AAGCCGGTCA TCTGA
 
Protein sequence
MTTNLLDFDL DGLAAFCERL GEKRFRATQL FRWIHQRGAS DFDQMSDLAK SLREKLRGCA 
HVAGLQAISE HVSADGTVKW LFDVGDGNAV ETVFIPEDDR GTLCISSQAG CAVGCRFCST
GHQGFSRNLT TGEILAQLWY AEHALRQRRG DGERVISNVV MMGMGEPLQN YAALVPALRV
MLDDHGYGLS RRRVTVSTSG VVPMMDRLAQ DCPVALAVSL HAPNDVLRDN LVPLNRKYPL
HELLAACRRY LDHAPRDFIT FEYCMLEGVN DQPEHARQLI DLVGRKAADG GVSCKFNLIP
FNPFPASGLR RSPPAAVTAF AQLLSDAGIV TTVRKTRGDD IDAACGQLAG DVKDRTRVNE
RMAKLRTIEI KPVI