| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1164 |
|---|
| Symbol | |
|---|
| ID | 4672199 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 1229331 |
|---|
| End bp | 1230035 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639838281 |
|---|
| Product | condensin subunit ScpB |
|---|
| Protein accession | YP_985472 |
|---|
| Protein GI | 121593576 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1386] Predicted transcriptional regulator containing the HTH domain |
|---|
| TIGRFAM ID | [TIGR00281] segregation and condensation protein B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTCGG TGGACGCCAA ACGGGTTCTT GAAACCGCGT TGATCTGTGC CCCGCAGCCT
GTATCGATCC GTGACTTGCG GACATTGTTC GATGACGCGC TGGGTTCCGA TACAGTAAAG
ATGCTGCTGC TGGAACTGCA GCAGGACTGG GCCTTGCGAG GGGTGGAGTT GGTACAAGTG
GCCACAGGTT GGCGTTTCCA GAGCCGGCCC GAGATGCGCG AATTTCTGGA CCGGTTGCAT
CCTGAAAAGC CGCCCCGCTA CACGCGAGCG ACGCTGGAGA CGCTGGCCAT CATTGCGTAC
CGGCAGCCCG TGACCCGCGG GGACATCGAA GATATCCGTG GGGTGACGGT CAACAGCCTC
ATCATCAAAC AACTGGAGGA CCGCGGCTGG GTGGAGGTCA TTGGCCACCG CGAGACAGTG
GGCCGGCCTG CGTTGTTTGC TACCACACGG CAGTTCCTGG ACGATTTGGG ACTGCAATCA
CTGGATCAAC TGCCTACGCT CGAAGACCCC GGCGTGCAGG TCAGCATGTT TGAAGCGCTG
GGCGCCATTC AGTTGGCACC GCAGAGCGAA GACACTGCAG GGGTACCTGA GGACGGCGTG
CAGGTGCCGG CCGTAGACGA AGTAGATATT GAAGATGCCC CTGATCTCGT AGTGGGCGCG
ACACACAGTG GTGCCGAAGA GGGGCCACGG GACATTGACA TATGA
|
|---|
| Protein sequence | MNSVDAKRVL ETALICAPQP VSIRDLRTLF DDALGSDTVK MLLLELQQDW ALRGVELVQV
ATGWRFQSRP EMREFLDRLH PEKPPRYTRA TLETLAIIAY RQPVTRGDIE DIRGVTVNSL
IIKQLEDRGW VEVIGHRETV GRPALFATTR QFLDDLGLQS LDQLPTLEDP GVQVSMFEAL
GAIQLAPQSE DTAGVPEDGV QVPAVDEVDI EDAPDLVVGA THSGAEEGPR DIDI
|
|---|
| |