Gene Ajs_1141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1141 
Symbol 
ID4671932 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1201125 
End bp1201604 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content65% 
IMG OID639838259 
Productcytochrome c, class I 
Protein accessionYP_985450 
Protein GI121593554 
COG category[C] Energy production and conversion 
COG ID[COG3245] Cytochrome c5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.828692 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.616371 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTTTT GGTTTTGGAC GTCAACAAGA AAGGCTTTCA TGAAAAAGAC ATCTCTCACG 
ATGGCGCTGG CCGCCGCAAC CCTGCTGCTC GCCGCCTGTG GCAAAAACGA CGCTCCGGCG
CCCGCGCCTG CTCCTGCACC CGCTGCGCAA GCACCGGCTC CCGCGCCTAC CCCTGCTCCC
GCGCCAGCCG CTCAAGCACC TGCCGCCGCC CCCGCGACGG CGGAGAACAC CGTCGGTAAG
AGCGTGTACG GCAAAACCTG CGCGATGTGC CATGCGGCCG GCGTTGCAGG GGCTCCCAAG
CCTGGCGATA AGGCCGATTG GGCGCCGCGT ATTGCCCAGG GCAAGGACAC GCTCTACAAG
CACGCCATCG AAGGCTTCAC CGGCAGCAAG GGCATGATGC CCGCGCGCGG CGGCGCGGCT
TCGTTGAGCG ACGACGAAGT GAAGGCTGCC GTGGATTTCA TGGCTGACCA GTCGATGTAA
 
Protein sequence
MPFWFWTSTR KAFMKKTSLT MALAAATLLL AACGKNDAPA PAPAPAPAAQ APAPAPTPAP 
APAAQAPAAA PATAENTVGK SVYGKTCAMC HAAGVAGAPK PGDKADWAPR IAQGKDTLYK
HAIEGFTGSK GMMPARGGAA SLSDDEVKAA VDFMADQSM