Gene Ajs_1118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1118 
Symbol 
ID4671212 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand- 
Start bp1175365 
End bp1176042 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content69% 
IMG OID639838236 
ProductGntR family transcriptional regulator 
Protein accessionYP_985427 
Protein GI121593531 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.232597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.166977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCT CCACCACCGG CTTCATCGTC GAAAGCCTCA CGCGCGCCAT CGTCGAGCAC 
CGCCTGCTGC CCGGCACCAA GCTGGCCGAG CAGAAGCTCG CCGACCATTT CGGCGTGTCG 
CGCACGCTGG TGCGCCAGGC GCTGTTCCAG CTGTCGCAGA ACCGCCTGAT CCGTCTGGAG 
CCCGCGCGCG GCGCCTTCGT GGCCGCGCCT TCGGTCCAGG AAGCGCGCCA GGTGTTCGCC 
GTGCGCCGCA TGCTGGAGGC CGAGATGGTG CGTGCCTTCC TGGCGCAGAG CACGCCCGCG 
AAAATCCGCG CGCTGAAGGC CCATGTGGCG GCCGAGAAGA AGGCCATGGA GGGCAACGAC 
GTGGGCCAGC GCACCGAGCT GCTGGGCGAC TTCCACGTGC GCATGGCCGA GCTCATGGGC 
AACGACGTGC TGGCCCAGTT GCTGGGCGAG TTGATCTCGC GCTGCGCCCT CATCACGCTG 
ATGTACCAGT CCACCACCGC CGCCGAGCAT TCGCACGAGG AGCACGCCGC CATCGTCGCG 
GCACTGGCCG CGGGCGACGC TGCGCAGGCC GTGCAGCTGA TGCAGCAGCA CCTGGACAAC 
GTGGAGGCGG GCCTGACCTT CGACCGCGAC CTGCCGACCA ACGACCTTTC GATGGCCCTT 
TCCTCCGTAT CGCCATGA
 
Protein sequence
METSTTGFIV ESLTRAIVEH RLLPGTKLAE QKLADHFGVS RTLVRQALFQ LSQNRLIRLE 
PARGAFVAAP SVQEARQVFA VRRMLEAEMV RAFLAQSTPA KIRALKAHVA AEKKAMEGND 
VGQRTELLGD FHVRMAELMG NDVLAQLLGE LISRCALITL MYQSTTAAEH SHEEHAAIVA 
ALAAGDAAQA VQLMQQHLDN VEAGLTFDRD LPTNDLSMAL SSVSP