Gene Ajs_1088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1088 
Symbol 
ID4671240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1143166 
End bp1144608 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content56% 
IMG OID639838207 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_985399 
Protein GI121593503 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin 
TIGRFAM ID[TIGR02745] cytochrome c oxidase accessory protein FixG 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.542253 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCAG CCGAAGGTCA GCCCCGTAAG GTGATTCCTA TCACGCCAGT GGGGGCCGAA 
AGTTCGCAGA CCGAGGTCAT TTCGCTCTAT GAGGCGCAAA AGAAAATCTA TCCACGCTCG
ATAAGTGGAG TGTTCGCCCG TTGGCGTTGG GCGATGGTGT TTCTGACACA GCTGGTTTTC
TATGGCCTGC CATGGCTGGA GTGGGGCCAG CGCCAAATGG TGCTCTTTGA CCTCGGAGCA
CGCCGTTTCT ATATTTTTGG TTTGGTGCTT TACCCGCAGG ACTTCATTTA TCTGACGGGT
TTGCTGATTA TTTCCGCGCT GTCGCTTTTT CTGTTTACCG CAGTGGCGGG ACGCCTGTGG
TGCGGCTTCT CCTGTCCCCA GACCGTATAC ACGGAAATGT TCATGTGGAT CGAGCACAAA
GTCGAAGGCG ACCGCAGTGC CCGTATGCGC CTGGACAATG GTCCGTGGAC ATTTGAGAAG
ATCTGGAAAA AAACTGTCAA GCAAGCCATT TGGATTGCGG TCGCGTTCTG GACCGGCTTC
ACCTTCGTGG GCTATTTCGT TCCGATTCGC GAGCTGGGGG AAGAGTTGCT GGCCCTGCAA
GGAGGGTGGC AGATATTCTG GGTGATCTTC TATGGGTTGG CCACGTACGG CAACGCAGGA
TTCCTGCGCG AGCAGGTGTG CAAATACATG TGCCCTTATG CGCGTTTCCA AAGCGCAATG
TTCGACAGGG ACACGCTGGT CGTCTCTTAC GATCCCGAGC GCGGCGAGCC TCGCGGGCCC
CGTAACAAGA TGGTAGACCA CAAAGCTGCG GGACTGGGTG ACTGCATCGA TTGCACGCTG
TGTGTCCAGG TCTGCCCAAC GGGTATCGAT ATTCGCAACG GACTGCAATA CGAATGCATT
GGTTGCGGTC TCTGCGTGGA CGCTTGCAAT ACCGTGATGG ATAAGATGAA GTATCCGCGC
GGGCTGATTC GCTTCTCGAC GCAGAACGGC GTCAAGAACC ACTGGACCCA ATCGCAAATG
CTCAAACGCG TGCTGCGACC CCGTGTGTTG TTCTATTCAG CGGTGCTGGT GGTGTTGTGC
ATCGGCATGC TGGCCAGCTT GGTGGTACGC ACCCCGTTGA AGGTGGACAT CGTGCGCGAC
CGCGCTGCGC TCTCGCGCAT CGTGGCGGGA GGCAAGCTGG AAAATATCTA CCGGCTGCAG
ATCATGAACG CCACGGAGGG GGCGCAGCGC TACACCATCA GCGCCCACGG CATGGAAGGG
CTGGAAGTGG CGTCCGAGAC CGCAATTGAT ATTGGACCGG CGGAATCCCG ATGGGTGGTT
GTCCGTCTTC AAATTCCGTA TGGCTCAGCA TCTCCTGGAT CGCATACGGT GTATTTCGAT
ATTCAAGCGC AGGGTGATAA AGCCCAAGTG GCAGAGAAAT CCGTGTTCCT TGTACCCCGC
TGA
 
Protein sequence
MKPAEGQPRK VIPITPVGAE SSQTEVISLY EAQKKIYPRS ISGVFARWRW AMVFLTQLVF 
YGLPWLEWGQ RQMVLFDLGA RRFYIFGLVL YPQDFIYLTG LLIISALSLF LFTAVAGRLW
CGFSCPQTVY TEMFMWIEHK VEGDRSARMR LDNGPWTFEK IWKKTVKQAI WIAVAFWTGF
TFVGYFVPIR ELGEELLALQ GGWQIFWVIF YGLATYGNAG FLREQVCKYM CPYARFQSAM
FDRDTLVVSY DPERGEPRGP RNKMVDHKAA GLGDCIDCTL CVQVCPTGID IRNGLQYECI
GCGLCVDACN TVMDKMKYPR GLIRFSTQNG VKNHWTQSQM LKRVLRPRVL FYSAVLVVLC
IGMLASLVVR TPLKVDIVRD RAALSRIVAG GKLENIYRLQ IMNATEGAQR YTISAHGMEG
LEVASETAID IGPAESRWVV VRLQIPYGSA SPGSHTVYFD IQAQGDKAQV AEKSVFLVPR