| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1065 |
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| Symbol | |
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| ID | 4670893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1117998 |
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| End bp | 1119374 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639838184 |
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| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
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| Protein accession | YP_985376 |
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| Protein GI | 121593480 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0443751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTGCCGCT TTGGCCTTTG CGTTCCTGCC GCCATTGGTG CGGCAGGGGC CCGTTCAACC
CGTCACAACC GAGGAAGGAC CCACACGGTG GCCAAGCAAA TCATCATCGA CCATGTCTTC
AAGGTCTTCG GCGACTCGCC GCAGGAAGCG CTGCGCCTGG TGCAGCAGGG CCTGAGCAAG
CAGCAGATCC TGGAGCGCAC GGGCCATTCC ATCGGTGTGT TCGATGCCAG CTTCACCATC
GAGGCCGGCG AAATCTTCGT CGTCATGGGC CTATCGGGCT CGGGCAAGTC CACGCTGGTG
CGCATGCTCA ACCGCCTGAT CGAGCCCACC AGCGGCCGCA TCCTGGTGGA CGGCCAAGAC
ATCAACCGTC TGGGCGACCG CGAGTTGCGC GCGCTGCGGC GCAAGGACAT CAGCATGGTG
TTCCAGTCGT TCGCCCTGAT GCCGCACATG ACGGTGCTGG ACAACGCCGC CTTCGGGCTG
GAACTCGCCG GAGTGGACCG TGCCGAGCGC CAGCAGGCAG CGCAGGAGGC CCTGCAGCAG
GTGGGCCTGG GCGCCTGGGG CGCCAGCTAC CCCGACGAAC TCTCGGGCGG CATGCAGCAA
CGCGTGGGGC TGGCGCGCGC GCTGGCAGCC GACCCGTCCA TCCTGCTCAT GGACGAGGCG
TTCTCCGCGC TGGACCCGAT CATCCGCACC GAGATGCAAA GCGAGCTGCT GCGCCTGCAG
CAGATCAAGC GCCGCACCAT CGTCTTCATC TCGCACGACC TGGACGAGGC CATGCGCATC
GGCGACCGCA TCGCCATCAT GAAGGACGGC CACGTGGTGC AGGTGGGCAC GCCCGACGAG
ATCCTGCGCG CGCCTGCCAA CGACTACGTA CGCAGCTTCG TGCGCGGCGT GGACGCTGCG
GCGGTGTTCA AGGCGGCCGA CATCGCGCGC CAGGCGCTCA CCGTGGTGTC CGAGCACGAC
GACCGCGGCT GCCGCGCGGC ACTGCGCCTG CTGGAGGACT CGGACCGCGA CCACGCCTAC
GTGCTCAACA GCCGCAAGCG CCTGCTGGGC GTGGTGTCGT CGCAGTCGCT GCGCGAAGCG
CTGCACGGCC GCCAGGGCGC GCTGGGCCTG CACCACGCCT TCTTACCCAA TGCCCAGCCG
CTGGATGCCT CCACGCCGGT GGCGGACCTG TTCGGCCCCA TGGGCAGTGC GCCCTGCCCG
CTGCCGGTGG TGGACGAGGA CGGCATCTAC CAGGGCGTGA TCAGCCGCAC CACGCTGATG
AAGTTCCTGG ACCGCGACAC GCCGCCCGTG CCGCCGCCGC AGGCGGAGGT GCCACCCATC
CAGCTCAACC CCCACTTCCC GGCGCAAGCC AGCACGCCGG TGGCAGCGCC CCGCTAA
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| Protein sequence | MCRFGLCVPA AIGAAGARST RHNRGRTHTV AKQIIIDHVF KVFGDSPQEA LRLVQQGLSK
QQILERTGHS IGVFDASFTI EAGEIFVVMG LSGSGKSTLV RMLNRLIEPT SGRILVDGQD
INRLGDRELR ALRRKDISMV FQSFALMPHM TVLDNAAFGL ELAGVDRAER QQAAQEALQQ
VGLGAWGASY PDELSGGMQQ RVGLARALAA DPSILLMDEA FSALDPIIRT EMQSELLRLQ
QIKRRTIVFI SHDLDEAMRI GDRIAIMKDG HVVQVGTPDE ILRAPANDYV RSFVRGVDAA
AVFKAADIAR QALTVVSEHD DRGCRAALRL LEDSDRDHAY VLNSRKRLLG VVSSQSLREA
LHGRQGALGL HHAFLPNAQP LDASTPVADL FGPMGSAPCP LPVVDEDGIY QGVISRTTLM
KFLDRDTPPV PPPQAEVPPI QLNPHFPAQA STPVAAPR
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