| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1039 |
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| Symbol | |
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| ID | 4670644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1083969 |
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| End bp | 1085051 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639838159 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_985351 |
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| Protein GI | 121593455 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0821806 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGTC GCTCAATCAT CAAGCAGGCC GGTTTGGCTG GCGTACTCGC AGCCGGGGTT
GCACCCGCAG TGCATGCCCA GGCCGCCGTT CGCTGGCGCC TTGCCTCCAG CTTCCCCAAG
TCGCTGGACA CGATCTTTGG CAGTGCAGAA AAATTGTCCC AGGCCGTCAA GGCGATGTCG
GGCGGCAAGT TTGAGATCTC CGTGCACCCC GCCGGCGAGC TGATGCCCGC GTTTGGCGTG
GTGGATGCGC TGCAGGGCGA CACCATCGAT ATGGCCCAGA CGGCCGCCTA CTACTTCACC
GGCAAGGACC CCGTGTTCGC CTTCAGCTGC GCTGTGCCCT TCGGCCTGAC CACGCTGCAG
ATGGCAGCCT GGAAGGACCA CGGCAACGGC CGCAAGTACC TGGATGCCTT CTTCGAGAAG
TACAACTTCA AGACCGCCAG CGCCGGCAAC ACCACCACCC AGATGGGCGG CTGGTACCGC
AAGGAAATCA AGACCGTCGC TGACCTCAAG GGCCTGAAGA TGCGCCTGGG CGGCGGCGTG
TTCGGCGAGG CCATGGCCAA GCTGGGCGTG GTGGCGCAGA ACATGCCCGC CGGTGACGTG
TACCAGGCGC TCGAGAAGGG CACGCTGGAC GCCGTGGAGT TCGTTGGCCC GTACGACGAT
GAAAAGCTGG GCTTCAACAA GGTGGCGCCG TACTACTACT ATCCCGGCTG GTGGGAAGGC
TCCGCTGACC TGGAGTTCTT CATCAACATC AAGAAGTACA ACGCCCTGTC GCCCGAGCAC
AAGGCGATCC TGGACGCAGC CACCCGCGTG GCCGCTGCCG ACATGACCGC CAAGTACCAG
GTGTTCAATC CGCGCGCCAT CAAGAACCTG GTGGCCAACA AGACGCAACT CAAGGCGTTC
CCCAAGGCGA TCATGGACGC CGGCTTCAAG GCGTCGATGG AAGTGTTTGC CGAGCACGAG
GCCAAGTCGC CCGAGTTCAA GAAGATCCAC CAGGACATGC GCGCCTTCCA GCGCGACCAG
ATCCTGTGGA ACCGCTTCTC GGAGTTCCCG TTCAACCAGT ACATGAACAG TGTGAAGATC
TGA
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| Protein sequence | MDRRSIIKQA GLAGVLAAGV APAVHAQAAV RWRLASSFPK SLDTIFGSAE KLSQAVKAMS
GGKFEISVHP AGELMPAFGV VDALQGDTID MAQTAAYYFT GKDPVFAFSC AVPFGLTTLQ
MAAWKDHGNG RKYLDAFFEK YNFKTASAGN TTTQMGGWYR KEIKTVADLK GLKMRLGGGV
FGEAMAKLGV VAQNMPAGDV YQALEKGTLD AVEFVGPYDD EKLGFNKVAP YYYYPGWWEG
SADLEFFINI KKYNALSPEH KAILDAATRV AAADMTAKYQ VFNPRAIKNL VANKTQLKAF
PKAIMDAGFK ASMEVFAEHE AKSPEFKKIH QDMRAFQRDQ ILWNRFSEFP FNQYMNSVKI
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