| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0977 |
|---|
| Symbol | |
|---|
| ID | 4673794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 1017794 |
|---|
| End bp | 1019137 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639838101 |
|---|
| Product | glutamate dehydrogenase |
|---|
| Protein accession | YP_985293 |
|---|
| Protein GI | 121593397 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0334] Glutamate dehydrogenase/leucine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0965022 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCACC AATCCGTGGG CCATTTCCTT GAACAGGTTG CACAGCGCAA CCCCGGCCAG
CCCGAATACC TGCAAGCCGT GACCGAGGTC ATGGAAAGCC TGTGGCCGTT CATCGAAAAG
AATCCGCGCT ATGCCGAGCA AGGCCTGCTG GAGCGCCTGG TGGAGCCCGA GCGGGTGGTG
ATGTTCCGCG TGTCCTGGTT CGACGATCAC GGCAATGTGC ATATCAACCG CGGCTACCGC
ATCCAGCACA GCATGGCGAT CGGCCCATAC AAGGGCGGCC TGCGCTTTCA CCCCTCGGTC
AACCTGTCGG TGCTGAAGTT CCTGGCCTTC GAGCAGACCT TCAAGAACGC GCTGACCACG
CTGCCCATGG GCGGCGGCAA GGGCGGCTCG GACTTCGACC CCAAGGGCAA GAGCCCGGCC
GAAGTCATGC GCTTTTGCCA GGCCTTCGTG ACGGAGCTGT TCCGCCACGT GGGTCCCGAC
ACCGACGTGC CCGCGGGTGA TATCGGCGTG GGCGGCCGTG AGGTCGGCTT CATGGCCGGC
ATGTACAAGA AGCTGGCCAA CAACGCCGCC AGCGTGTTCA CGGGCAAGGG CCTGGCCTTC
GGCGGCTCGC TGATCCGCCC CGAGGCCACC GGCTACGGCA CGGTGTACTT CGCCGACGAG
ATGCTCAAGA CCCGCGGCCG CAGCTTCGAC GGCCTGCGCG TGTCCGTGTC CGGCTCGGGT
AACGTGGCCC AGTACGCCGT GGAAAAGGCC ATGCAACTCG GCGCCAAGGT CATCACCGTG
TCGGACTCCA GCGGCACCAT CATCGACGAA GACGGCTTCA CCCCCGAGAA GCTGGCCATC
CTGATGGACG TGAAGAACCA CCATTACGGC CGCGTGAGCG ACTACGCCGC GCGTACCGGC
GTGAAGTTCG AAGCCGGCGT GCGTCCCTGG CATGTCAAGG TGGACGTGGC CCTGCCCTGC
GCCACGCAAA ACGAGCTGGA CGAAAACGAC GCCCGCACCC TCATCAAGAA CGGCGTGCTG
TGCGTGGCCG AAGGCGCCAA CATGCCCTCG ACCAACGAGG CAGCCAAACT GTTCGAGCAG
GCGGGCGTGC TGTACGCACC GGGCAAGGCC AGCAACGCCG GTGGCGTGGC CACCTCGGGC
CTGGAAATGA GCCAGAACGC CATGCGCCTG TCGTGGACCC GCGACGAAGT GGATGCGCGC
CTGCTCCAGA TCATGCAGGG CATCCACGCC GCCTGCCTGC AATACGGCAA GCGCGCCGAT
GGCAGCGTGA GCTACATCAA CGGTGCCAAC GTGGCTGGAT TCGTGAAGGT GGCCGAGGCT
ATGCTGGCGC AAGGCGTGGT CTGA
|
|---|
| Protein sequence | MKHQSVGHFL EQVAQRNPGQ PEYLQAVTEV MESLWPFIEK NPRYAEQGLL ERLVEPERVV
MFRVSWFDDH GNVHINRGYR IQHSMAIGPY KGGLRFHPSV NLSVLKFLAF EQTFKNALTT
LPMGGGKGGS DFDPKGKSPA EVMRFCQAFV TELFRHVGPD TDVPAGDIGV GGREVGFMAG
MYKKLANNAA SVFTGKGLAF GGSLIRPEAT GYGTVYFADE MLKTRGRSFD GLRVSVSGSG
NVAQYAVEKA MQLGAKVITV SDSSGTIIDE DGFTPEKLAI LMDVKNHHYG RVSDYAARTG
VKFEAGVRPW HVKVDVALPC ATQNELDEND ARTLIKNGVL CVAEGANMPS TNEAAKLFEQ
AGVLYAPGKA SNAGGVATSG LEMSQNAMRL SWTRDEVDAR LLQIMQGIHA ACLQYGKRAD
GSVSYINGAN VAGFVKVAEA MLAQGVV
|
|---|
| |