| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0953 |
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| Symbol | |
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| ID | 4672949 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 994145 |
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| End bp | 996328 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639838076 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_985269 |
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| Protein GI | 121593373 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0000928829 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCATTT TTAACAAGGT CACCAAGTCG TTCCAGTGGG GTGACAAGAC CGTTGTCATG
GAAACGGGTG AGATCGCACG GCAGGCCTCA GGCGCCGTGC TGGTGAACAT TGACGACACC
GTAGTGCTCG CTACCGTGGT GGGGTCCAAG CAGGCCAAGC CTGGCCAGGA CTTCTTCCCG
CTGACGGTGG ACTACATCGA GAAGACCTAC GCCGCCGGCA AGATCCCCGG CAGCTTCTTC
AAGCGCGAGG CCAAGCCCAG CGAGTTGGAG ACGCTGACCA GCCGCCTGAT CGATCGCCCG
ATCCGCCCGC TGTTCCCCGA GGGCTTCTAC AACGAGGTGC ATGTGGTCAT CCACACCATC
TCGCTGAACC CCGAAGTGGA CGCTGACATC GCCGCCATGA TCGCCGTGAG CGCAGCGCTG
TCCGTTTCCG GTATTCCGTT CAATGGCCCC ATCGGCGCCG CACGCGTGGG CTACGTCAAT
GGCGAATACG TGCTGAACCC CGGGCAGACC GCGCGCAAGA GCTCGCAGCT GGACCTGGTG
GTGGCGGGCA CCGAGGCCGC TGTGCTGATG GTGGAGTCCG AAGCGCAGCA GTTGTCCGAA
GAGATCATGC TGGGCGCCGT GGTGTTCGGC CACGAGCAGG GCAAGGTGGC GATCAACGCC
ATCCATGAGC TGGTGCGCGA CGCTGGCAAG CCCGTGTGGG ACTGGCAGCC GCCTGCCAAG
GACGAGACTT TCATCGCCAA GGTCACGGCC CTGGCAGAGG GCAAGCTGCG CGCGGCTTAC
CAGATCCGCA GCAAGCAGGC CCGCACCCAG GCACTGCGCG AGGCATCGGC CTCGGTGCTG
GAATCGCTGA AGGGCGAGGG CGTGGAGTTC GACGCCGTGA AGGTCGAGGC CCTGCTGTTC
GACATCGAAG CCAAGATCGT GCGCAGCCAG ATCCTGGCCG GCGAGCCCCG CATCGACGGC
CGCGACACGC GCACCGTGCG TCCCATCGAG ATCCGCAACT CCGTGCTGCC CCGCACCCAC
GGCTCCGCCC TGTTCACGCG TGGCGAAACC CAGGCGCTGG TGGTGTCCAC GCTGGGCACC
GAGCGCGATG CGCAGCGCAT CGACGCACTG GCCGGCGAGT TCGAAGACCG TTTCATCTTC
CACTACAACA TGCCTCCCTT CGCCACGGGT GAAGTGGGCC GCATGGGCTC GACCAAACGC
CGCGAAATCG GCCACGGCCG CCTGGCCAAG CGCGCCCTGG TGGCCTGCCT GCCGAGCAAG
GACGAGTTCC CCTACACCAT CCGCGTGGTG TCGGAGATCA CCGAATCCAA CGGCTCCTCG
TCCATGGCAT CGGTCTGCGG CGGCTGCCTG TCGCTGATGG ATGCCGGCGT GCCCATGAAG
GCGCACGTGG CCGGCATCGC CATGGGCCTG ATCAAGGAAG ACAACCGCTT CGCCGTACTG
ACCGACATCT TGGGCGATGA GGACCACCTG GGCGACATGG ACTTCAAGGT GGCCGGTACG
ACCAACGGCA TCACCGCCCT GCAGATGGAC ATCAAGATCC AGGGCATCAC CAAGGAAATC
ATGCAGGTCG CCCTGGCGCA GGCCAAGGAA GCACGTATGC ACATCCTGGG CAAGATGCAG
GAAGCCATGG GTGAAGCCAA GACCGAGATC TCATCCTTCG CGCCCAAGCT CTACACGATG
AAGATCAACC CAGAGAAGAT CCGCGACGTG ATCGGCAAGG GCGGCGCCAC CATCCGTGCC
CTGACGGACG AGACCGGCTG CCAGATCAAC ATCGAGGAAG ACGGCACCAT CACCATCGCA
GCCACCGAGG CTGCCAAGGC TGATGAAGCC AAGCGCCGCA TCGAAGAGAT CACGGCTGAG
GTTGAAGTGG GCAAGATCTA CGAAGGCCCT GTCACCAAGA TCCTGGACTT CGGCGCGTTG
ATCAACCTGC TGCCCGGCAA GGACGGCCTG CTGCACATCA GCCAGATCGC CCACGAGCGT
GTGGAAAAGG TGGGCGACTA CCTGCAGGAA GGTCAGATCG TGAAGGTCAA GGTGCTGGAG
ACCGACGACA AGGGCCGCGT CAAGCTGTCC ATGAAGGCGC TGGCTGACCG CCCCGCCGGC
GACAGCGGCC GTCCCGCCCC TGCGGAGCGG GGCGAGCGTC GTGAGCGTCG TGATGGCGGT
GCTTCCGAGC AACAGCAGCA GTAA
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| Protein sequence | MSIFNKVTKS FQWGDKTVVM ETGEIARQAS GAVLVNIDDT VVLATVVGSK QAKPGQDFFP
LTVDYIEKTY AAGKIPGSFF KREAKPSELE TLTSRLIDRP IRPLFPEGFY NEVHVVIHTI
SLNPEVDADI AAMIAVSAAL SVSGIPFNGP IGAARVGYVN GEYVLNPGQT ARKSSQLDLV
VAGTEAAVLM VESEAQQLSE EIMLGAVVFG HEQGKVAINA IHELVRDAGK PVWDWQPPAK
DETFIAKVTA LAEGKLRAAY QIRSKQARTQ ALREASASVL ESLKGEGVEF DAVKVEALLF
DIEAKIVRSQ ILAGEPRIDG RDTRTVRPIE IRNSVLPRTH GSALFTRGET QALVVSTLGT
ERDAQRIDAL AGEFEDRFIF HYNMPPFATG EVGRMGSTKR REIGHGRLAK RALVACLPSK
DEFPYTIRVV SEITESNGSS SMASVCGGCL SLMDAGVPMK AHVAGIAMGL IKEDNRFAVL
TDILGDEDHL GDMDFKVAGT TNGITALQMD IKIQGITKEI MQVALAQAKE ARMHILGKMQ
EAMGEAKTEI SSFAPKLYTM KINPEKIRDV IGKGGATIRA LTDETGCQIN IEEDGTITIA
ATEAAKADEA KRRIEEITAE VEVGKIYEGP VTKILDFGAL INLLPGKDGL LHISQIAHER
VEKVGDYLQE GQIVKVKVLE TDDKGRVKLS MKALADRPAG DSGRPAPAER GERRERRDGG
ASEQQQQ
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