| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0925 |
|---|
| Symbol | |
|---|
| ID | 4671865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 972797 |
|---|
| End bp | 973813 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639838047 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_985241 |
|---|
| Protein GI | 121593345 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.00180429 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAAA TCAAGCCGCC CCCCCTGCCC CCCGATACCG CCATTGGCGG CTACCGCGTG
GTGCGACGGC TGTCCTCCGG TGGTTTTGGC GTGGTGTACC TCGCCATTGA CGCCGAAGGC
CAGCAAGTGG CCATCAAGGA ATACCTCCCC GCTTCTCTGG CTACGCGTGC ACCGGGCGAA
CTGCTGCCCA AGGTGCCGCC CGAGAAGCTC TCGCTCTACC GTCTGGGCCT CAAGAGCTTC
TTCGAGGAAG GCCGTGCGCT CGCGCAGATC TCGCACGCCT CCGTGGTGAG CGTGCTCAAC
TTCTTCCGCG AGAACGAGAC CGTCTACATG GTGATGAACT ACCTGGAGGG CGCGACCCTG
CAGGACTTCA TCATCACCGC ACGCGACCTC AAGACGCAGA AGGTGTTCCG CGAGTCCACC
ATCCGCTCGC TGTTCGATGA GGTGCTGCGC GGCCTGCGCA TCGTGCACCA GCACAAGATG
CTGCACCTGG ACATCAAGCC CGCCAACATC TTCATCACCG ACGACAACCG CGCGGTGATG
ATCGACTTCG GCGCCGCGCG CGAGGTACTC TCCAAAGAGG GCAACTTCAT CCGCCCGATG
TACACCCCCG GCTTTGCTGC GCCCGAGATG TACCGCCGCG ACTCGCAGAT GGGCCCTTGG
ACGGACATCT ACGCCGTTGG CGCCTGCATC TATGCGTGCA TGCAGGGATT TCCGCCCAAC
GAGGCGCCGC AGCGCCAGGA GAAGGACCGC CTGTCGCTGG CGCTGAACAA GCTGCGCGGT
GTGTATTCGG ACAACCTGAT CGAGGTGGTC GAATGGTGCA TGGCGCTCGA TCCGCTGTCG
CGCCCGCAAT CGGTGTTCGC GCTGCAAAAG GAGCTGAGCC GCGAGGGCGA GCGCCGCTAT
ACCAAACTGT CGGTGGCCGA GAAGATGCGC ATGCAGCTCG ACACCCTGGT GTCGGATACC
AAGAAAAACG TGCAAAAGGT GGGCGAAGCC ACCGGTCTGG GAGCGCGGCC TAAATGA
|
|---|
| Protein sequence | MSKIKPPPLP PDTAIGGYRV VRRLSSGGFG VVYLAIDAEG QQVAIKEYLP ASLATRAPGE
LLPKVPPEKL SLYRLGLKSF FEEGRALAQI SHASVVSVLN FFRENETVYM VMNYLEGATL
QDFIITARDL KTQKVFREST IRSLFDEVLR GLRIVHQHKM LHLDIKPANI FITDDNRAVM
IDFGAAREVL SKEGNFIRPM YTPGFAAPEM YRRDSQMGPW TDIYAVGACI YACMQGFPPN
EAPQRQEKDR LSLALNKLRG VYSDNLIEVV EWCMALDPLS RPQSVFALQK ELSREGERRY
TKLSVAEKMR MQLDTLVSDT KKNVQKVGEA TGLGARPK
|
|---|
| |