| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0862 |
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| Symbol | |
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| ID | 4672719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 909599 |
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| End bp | 910912 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639837985 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_985180 |
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| Protein GI | 121593284 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.597127 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATCA AACACTTGGC GCTGGCCGCC GCAGTGGCCG CCACCAGCCT GGCCGCACAA
GCTCAAACAG AGATCCAGTG GTGGCACTCC ATGACGGCTG TCAACAACGA GTGGGTCAAT
GACCTGGCCA AGCAGTTCAA CGAGAGCCAG AAGGAGTACA AGGTCATCCC TACCTTCAAG
GGGTCGTATG ACGAAAGCAT GACGGCCGCG ATCGCCGCGT TCCGCTCGGG CAATGCACCG
CACATCCTGC AGGTGTTCGA GGTGGGTACG GCCACGATGA TGGCCAGCAA GGGCGCCACC
GTCCCCGTGG GCAAGGTGAT GAAGGACGCG GGCGCTGCCT TCGACCCCAG CGCCTACATC
CCCGCCGTGG CTGCGTACTA CACCGACCCC AACGGCCAGA TGCTGAGCTT CCCGTTCAAC
AGCTCCACAA CCATCTTTTA TTACAACAAG GACGCCTTCA AGAAGGCCGG CCTGAACCCC
GACAAGGCTC CCGCCACCTG GCCCGAAGTG TTCGAGGCTG CCAAGAAGCT CAAGGCCAGC
GGCCACAGCT GCCCCATGAC GCTGGCCTGG ATGGGCTGGA CGCAGCTCGA ATCGTTCTCC
GCCTGGCACA ACGTGGAGTT CGCCACCGAG AAGAACGGCC TGTCGCCCAA CGGCTACAAG
GCCCGCATGA AGATCAATTC GCCGCTGCAC GTGCGCCACA TCGACAACCT GTCGCAGGCC
GCCAAGGCGG GCGAGTTCGT CTACAAGGGC CGCGGCTCGG CGGCCCAGGC GTCGTTCACC
TCGGGTGAGT GCGCCATGAT CCAGACGTCG TCGGGCTTCT ACGGCGATGT GGCCAAGAAC
GCCAAGTTCG CCTACGGCCT GGCGCCCCTG CCCTACTACC CCGACGTGAA GGGTGCACCG
CAGAACACCG TGATCGGCGG CGCATCGCTG TGGGTCATGG CCGGCAAGAA GCCCGCCGAA
TACAAGGGCG TGGCCAAGTT CTTCGAGTTC CTGTCCGACA CCAAGGTGCA GGCCGCCAGC
CACCAGCGCA CGGGCTACCT GCCCATCACC ATGGGTGCGT ATGAGCTGAC CGAAAAGTCC
GGTTTCTACG CCAAGCACCC CGGCACCGAC ACGGCCGTGA ACCAGATGGT GCGCAAGGTG
ACCGACAACT CGCGCGGCAT CCGCCTGGGC AACTATGTGC AGATCCGCAC CATTGAGGAC
GAAGAACTCG AACAGGTGTG GGCCGGCAAA AAGACGGCCA AGGAAGCCCT GGACTCCATC
GTGAGCCGCG GCAACGAACT GCTGGCGCGC TTCGAGCGCT CGTACAAGAA GTAA
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| Protein sequence | MQIKHLALAA AVAATSLAAQ AQTEIQWWHS MTAVNNEWVN DLAKQFNESQ KEYKVIPTFK
GSYDESMTAA IAAFRSGNAP HILQVFEVGT ATMMASKGAT VPVGKVMKDA GAAFDPSAYI
PAVAAYYTDP NGQMLSFPFN SSTTIFYYNK DAFKKAGLNP DKAPATWPEV FEAAKKLKAS
GHSCPMTLAW MGWTQLESFS AWHNVEFATE KNGLSPNGYK ARMKINSPLH VRHIDNLSQA
AKAGEFVYKG RGSAAQASFT SGECAMIQTS SGFYGDVAKN AKFAYGLAPL PYYPDVKGAP
QNTVIGGASL WVMAGKKPAE YKGVAKFFEF LSDTKVQAAS HQRTGYLPIT MGAYELTEKS
GFYAKHPGTD TAVNQMVRKV TDNSRGIRLG NYVQIRTIED EELEQVWAGK KTAKEALDSI
VSRGNELLAR FERSYKK
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