Gene Ajs_0832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0832 
Symbol 
ID4672588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp874052 
End bp874993 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content66% 
IMG OID639837954 
ProductDEAD-like helicases-like 
Protein accessionYP_985150 
Protein GI121593254 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0553] Superfamily II DNA/RNA helicases, SNF2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.76445 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAC TTGCCCACGA CTTCCTGCCT GGCAACCTGG TTCGCGCCCG AGGCCGCGAA 
TGGGTTGTGC AGACCGAATC GCGCCGCGAC TGGCTGCGCC TGCGGCCCCT CGGAGGTGTG
GAGGACGAGA CCATCGCCCT CATACCAGAA CTCGAACTGC TGCCCGTAGA GCACGCTACC
TTCGAAGCAC CCGATCCCGC ACGCGCCGGC AACCATGCCG CCGCCCTCCT GCTGCGCGAT
GCCCTGCGCC TGACCCTGCG CGCCGGTGCG GGCCCCTTCC GTTCATTCGG CAACATCGCC
GTAGAGCCGC GCGGCTACCA GTTGGTGCCT CTGCTGATGG CGCTGCGCCT GTCCACCGTG
CGCCTTCTGA TCGCCGACGA CGTGGGCATT GGCAAAACCA TCGAGGCCGG CCTCATTGCC
CGTGAATTGA TGGACCGAGG CGAAGTCACC CGCCTGGCCG TGCTTTGCCC GCCGCACCTG
GTGGAGCAAT GGCAATCCGA GTTGGAAGAA CGCTTCAACC TGCACGCCGT GGCCCTCACC
GCCGCCTCGG CCGCGCGGGT GGAGCGCGAA CTGCCCCACG GCGTACCCCT GTTCGACCAC
CACCCCGTCG TGGTGGTGAG CCTGGACTAC ATCAAGAGCG AGCGTCACCG CGAGCAATTC
ATCGCCACCG CGCCCGAATG CATCATCGTG GACGAAGCCC ACACCTGCGC CAGCAGCGGC
GCGGGCAAGC AACTGCGCTT CGAGCTGTTG CAACGCTTGG CCAGCAACGC GCACCGCCAC
CTCATCCTGC TCACCGCCAC GCCCCACTCG GGCGATGAAG CAGCGTTCTA CAACCTGCTG
TCCCTGCTGG ACACACGCTT TGCGGCCCTG CAAGGCCGCA TGTCCTGTTG GCGCCGACCG
AAAACTGAGC CACTTTTGAG GGTAGTGCCG ACCCAAAACT GA
 
Protein sequence
MTTLAHDFLP GNLVRARGRE WVVQTESRRD WLRLRPLGGV EDETIALIPE LELLPVEHAT 
FEAPDPARAG NHAAALLLRD ALRLTLRAGA GPFRSFGNIA VEPRGYQLVP LLMALRLSTV
RLLIADDVGI GKTIEAGLIA RELMDRGEVT RLAVLCPPHL VEQWQSELEE RFNLHAVALT
AASAARVERE LPHGVPLFDH HPVVVVSLDY IKSERHREQF IATAPECIIV DEAHTCASSG
AGKQLRFELL QRLASNAHRH LILLTATPHS GDEAAFYNLL SLLDTRFAAL QGRMSCWRRP
KTEPLLRVVP TQN