Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0831 |
Symbol | |
ID | 4672587 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 872459 |
End bp | 873991 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639837953 |
Product | integrase catalytic subunit |
Protein accession | YP_985149 |
Protein GI | 121593253 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4584] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACATGA TTGGCAGGAT CCGGCATTTG CATGCCCGGA AGAACAAATC GGAGCGCGAG ATATCGCGCA TGACAGGGCT CTCGCGCAAC ACGGTTGCGA AGTGGCTGCA CGGGGAAGTG GACGGTCCAC CGAAGTACCG GCGCGGCGAG CAGCCCAACA AACTCACGGC GTTCCATGAC GTGCTCAGGC AGGCCTTGAA GGCTGATGCA CGTCGGCCCA AACACGAGCG GCGCACAGCC AAGGCGCTGT ACGCCGAGAT CAGGCGTGCG GGCTATGAGG GTGGTTACAC GCGGGTGACC GACTTCATCC GGGCATGGCG CCAGGGCGAA GGCCAGGGGT CTGCGGGCAA CGCCTTCGTG CCGTTGGCCT TCGAGCTGGG CGAGGCTTTC CAGTTCGACT GGAGCGAGGA AGGCATGGTG ATCGGCGGCA TCTACTACCG GGTGCAGGTC TCACACATGA AGCTGTGCGC CAGTCGGGCT TTCTGGCTGG TGGCCTACCC CAGCCAGGGC CACGAGATGC TGTTCGATGC CCACACCCGC AGCTTCGCCG CGCTGGGTGG CGTGGCGCGC CGGGGCATCT ATGACAACAT GAAGACTGCG GTAGACAAGG TCAAGAAGGG CAAGGGGCGC ATCGTCAACG AGCGCTTTGC CACCATGTGC GCGCATTACC TGTACGACCC GGACTTCTGC AACGTGGCCA GCGGCTGGGA GAAAGGGGTG GTGGAGAAGA ACGTGCAAGA CAGCCGCCGG CGCATCTGGA TCGACGCGGC CAAGATCAAG TTCGGCAGCT TTACCGAACT CAACGCCTGG CTGGCCCAGC GCTGCCGCGC GTTGTGGGAC GAGGTGCGCC ACCCCGAGCA CACCCAGTTC AGCGTGGCCG AGATGCTCGA ACACGAGCGC GCGCACCTCA TGCCCATGCC CGTGCCGTTC GATGGCTACG TCGAGAAACC CGCTCGGGTC ACCAGCACCT GTCTGGTGTC GGTGGCGCGC AACCGCTATT CGGTGCCGTG CGAACGGGTG GGCCAGATGG TCAGTACGCG GTTGTATCCG GGCAGCGTCG CCATCGTGGC CGACGACACC ATCGTGGCCC GCCACGACCG GCTGAGCAAC GCGGGCGAGA CCCGGTACGA CTGGCAGCAC TACATCCCGC TGCTGCAGAG AAAGCCCGGT GCCCTGAGGA ACGGCGCGCC CTTTGCCGAC ATGCCCGAGC CGCTGCAGCG GCTGCGCCGT GGGCTGCTGC GCAACCCGGG CGGCGACCGG GTGATGGCGC AGGTGTTGGC CATTGTGCTC AGCGCCGGTC TGGACGCGGT GCTGGTGGCC ATCGAGCTGG CGCTGGAGAG TGGGCCGCCT GGCAAGGTCA GTGTGGAGCA CGTGGTCAAC GTGCTGAACC GGCTCAACGC GCAGCCGGTG CCGCCCACGG CGGCCACGCT GCTGAGAGCG ACCACGCCGC CGCTGGCGAA CACGGCGCGC TACGACAGCC TGCGCTCGGA CACCGTGGGT GCCATCACCG AAGGAGCCGA CCATGAAGAC TGA
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Protein sequence | MDMIGRIRHL HARKNKSERE ISRMTGLSRN TVAKWLHGEV DGPPKYRRGE QPNKLTAFHD VLRQALKADA RRPKHERRTA KALYAEIRRA GYEGGYTRVT DFIRAWRQGE GQGSAGNAFV PLAFELGEAF QFDWSEEGMV IGGIYYRVQV SHMKLCASRA FWLVAYPSQG HEMLFDAHTR SFAALGGVAR RGIYDNMKTA VDKVKKGKGR IVNERFATMC AHYLYDPDFC NVASGWEKGV VEKNVQDSRR RIWIDAAKIK FGSFTELNAW LAQRCRALWD EVRHPEHTQF SVAEMLEHER AHLMPMPVPF DGYVEKPARV TSTCLVSVAR NRYSVPCERV GQMVSTRLYP GSVAIVADDT IVARHDRLSN AGETRYDWQH YIPLLQRKPG ALRNGAPFAD MPEPLQRLRR GLLRNPGGDR VMAQVLAIVL SAGLDAVLVA IELALESGPP GKVSVEHVVN VLNRLNAQPV PPTAATLLRA TTPPLANTAR YDSLRSDTVG AITEGADHED
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