Gene Ajs_0765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0765 
Symbol 
ID4674535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp806044 
End bp806820 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content68% 
IMG OID639837888 
Product1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 
Protein accessionYP_985085 
Protein GI121593189 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase 
TIGRFAM ID[TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00934547 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
TTGTGCGGCT CGCCCCATTC CCCGCTCACC ATCATGCTGC TCATCCCCGC CATCGACCTC 
AAGGACGGCC ACTGCGTACG CCTCAAGCAA GGTGACATGG ACCAATCGAC CACCTTTGGC
GAAGACCCCG CCGCCATGGC CCGCAAGTGG GCGGATGCGG GCGCGCGCCG CCTGCACCTG
GTGGACCTGA ACGGCGCGTT TGCCGGCCAG CCCAAGAACA AGGCGGCCAT CAAGGCCATC
CTGGCCGAGG TGGGCTCGGA CATCCCGGTG CAGCTGGGCG GCGGCATCCG CGACCTGGAC
ACCATCGAGC GCTACATCGA CGCCGGGCTG CGGTACGTCA TCATCGGCAC GGCCGCGGTG
AAGAACCCCG GCTTCCTCAA GGATGCGTGC AGCGCGTTTG GCGGCCACAT CATCGTGGGC
CTGGACGCCA AGGACGGCAA GGTGGCCACC GACGGCTGGA GCAAGCTCAC CGGCCACGAG
GTGGTCGATC TGGCGCGCAA GTTCCAGGAC TGGGGCGTGG AATCCATCAT CTACACCGAC
ATCGGCCGCG ACGGCATGCT CTCGGGCATC AATATCGAGG CGACGGTGAA GCTGGCCCAG
GCCCTCACCA TCCCCGTGAT CGCCTCGGGC GGCCTGGCCG GCATGGCCGA CATCGAAAAG
CTCTGCGAAG TCGAGGACGA GGGCGTGGAG GGCGTGATCT GCGGCCGCGC CATCTACTCG
GGCGACCTGG ACTTCGCCGC GGCCCAGGCG CGCGCCGACG AGCTGGCCGG CGCGTAG
 
Protein sequence
MCGSPHSPLT IMLLIPAIDL KDGHCVRLKQ GDMDQSTTFG EDPAAMARKW ADAGARRLHL 
VDLNGAFAGQ PKNKAAIKAI LAEVGSDIPV QLGGGIRDLD TIERYIDAGL RYVIIGTAAV
KNPGFLKDAC SAFGGHIIVG LDAKDGKVAT DGWSKLTGHE VVDLARKFQD WGVESIIYTD
IGRDGMLSGI NIEATVKLAQ ALTIPVIASG GLAGMADIEK LCEVEDEGVE GVICGRAIYS
GDLDFAAAQA RADELAGA