Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0765 |
Symbol | |
ID | 4674535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 806044 |
End bp | 806820 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639837888 |
Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
Protein accession | YP_985085 |
Protein GI | 121593189 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00934547 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | TTGTGCGGCT CGCCCCATTC CCCGCTCACC ATCATGCTGC TCATCCCCGC CATCGACCTC AAGGACGGCC ACTGCGTACG CCTCAAGCAA GGTGACATGG ACCAATCGAC CACCTTTGGC GAAGACCCCG CCGCCATGGC CCGCAAGTGG GCGGATGCGG GCGCGCGCCG CCTGCACCTG GTGGACCTGA ACGGCGCGTT TGCCGGCCAG CCCAAGAACA AGGCGGCCAT CAAGGCCATC CTGGCCGAGG TGGGCTCGGA CATCCCGGTG CAGCTGGGCG GCGGCATCCG CGACCTGGAC ACCATCGAGC GCTACATCGA CGCCGGGCTG CGGTACGTCA TCATCGGCAC GGCCGCGGTG AAGAACCCCG GCTTCCTCAA GGATGCGTGC AGCGCGTTTG GCGGCCACAT CATCGTGGGC CTGGACGCCA AGGACGGCAA GGTGGCCACC GACGGCTGGA GCAAGCTCAC CGGCCACGAG GTGGTCGATC TGGCGCGCAA GTTCCAGGAC TGGGGCGTGG AATCCATCAT CTACACCGAC ATCGGCCGCG ACGGCATGCT CTCGGGCATC AATATCGAGG CGACGGTGAA GCTGGCCCAG GCCCTCACCA TCCCCGTGAT CGCCTCGGGC GGCCTGGCCG GCATGGCCGA CATCGAAAAG CTCTGCGAAG TCGAGGACGA GGGCGTGGAG GGCGTGATCT GCGGCCGCGC CATCTACTCG GGCGACCTGG ACTTCGCCGC GGCCCAGGCG CGCGCCGACG AGCTGGCCGG CGCGTAG
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Protein sequence | MCGSPHSPLT IMLLIPAIDL KDGHCVRLKQ GDMDQSTTFG EDPAAMARKW ADAGARRLHL VDLNGAFAGQ PKNKAAIKAI LAEVGSDIPV QLGGGIRDLD TIERYIDAGL RYVIIGTAAV KNPGFLKDAC SAFGGHIIVG LDAKDGKVAT DGWSKLTGHE VVDLARKFQD WGVESIIYTD IGRDGMLSGI NIEATVKLAQ ALTIPVIASG GLAGMADIEK LCEVEDEGVE GVICGRAIYS GDLDFAAAQA RADELAGA
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