Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0764 |
Symbol | hisH |
ID | 4674523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 805350 |
End bp | 806018 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639837887 |
Product | imidazole glycerol phosphate synthase subunit HisH |
Protein accession | YP_985084 |
Protein GI | 121593188 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0118] Glutamine amidotransferase |
TIGRFAM ID | [TIGR01855] imidazole glycerol phosphate synthase, glutamine amidotransferase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0089517 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAATAGTG AAGCAAAAAC CGTCGCGGTC GTGGACTACG GCATGGGCAA CCTGCGCTCC GTCTCGCAGG CCGTGCAGGT CGCGGCGCAG GGCAGCGGTT TCCGGGTAAT GGTCACCGCG CACCCCGATG AGGTACGCGC GGCCGACCGT GTGGTGTTGC CCGGCCAGGG CGCCATGCCG GACTGCATGC GCGAGTTGCG GGAGTCGGGC CTGCTCGAAT CCGTGCTGGA GGCTGCCGCG TCCAAGCCGC TGTTTGGCGT ATGTGTGGGC ATGCAGATGC TGCTGGACCA CAGCGCCGAG GGCGACACCC CCGGGCTGGG CCTGATCCCG GGCGAGGTGC TCAAGTTCGA CCTGGCCGGG CGCACCCAGC CCGACGGCAG CCGCTACAAG GTCCCCCAGA TGGGCTGGAA CCGCGTGCGC CAGGCGCGCC ACGGCGGCGT GGCGCACCCG GTATGGGCGG GCGTGCCCGA CGACAGCTAC TTCTACTTTG TGCACAGCTT CTACGCGCGC CCGGCCAACC CGCTGCACTG CGCCGGCGAG GCTGACTACG GCGGCCCCTT TGCTGCGGCC ATCGCACGCG ATAATATTTT TGCTACCCAG TTCCACCCGG AGAAAAGCGC CGAGCACGGC CTGGCGCTGT ACCGCAACTT CTTGCACTGG AAGCCCTGA
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Protein sequence | MNSEAKTVAV VDYGMGNLRS VSQAVQVAAQ GSGFRVMVTA HPDEVRAADR VVLPGQGAMP DCMRELRESG LLESVLEAAA SKPLFGVCVG MQMLLDHSAE GDTPGLGLIP GEVLKFDLAG RTQPDGSRYK VPQMGWNRVR QARHGGVAHP VWAGVPDDSY FYFVHSFYAR PANPLHCAGE ADYGGPFAAA IARDNIFATQ FHPEKSAEHG LALYRNFLHW KP
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