Gene Ajs_0749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0749 
Symbol 
ID4672195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp792464 
End bp793246 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content67% 
IMG OID639837872 
Producthypothetical protein 
Protein accessionYP_985069 
Protein GI121593173 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGGT GGCGTCCCAC GCACGTAGGC TACGCCGTGC GCACGAAGCT GGCCGATGTG 
GGCATGGGCG CGCGCCTGTT CGCGCGGCTG CTGGGGCTGT TCGGCGATGT GATGCGCCGC
CCTGGCCTGG TGCGTGACCA GGTGCACTTC CTGGGCAACT ATTCGCTGTC CATCATCGCC
ATGTCGGGCC TGTTTGTGGG CTTCGTGCTT GCGCTGCAGG GCTACAACGT GCTGCAGCTC
TATGGCTCGG CCAACTCACT GGGCCTGGTG GTCACGTTGG GTCTGGTGCG CGAGCTGGGG
CCGGTGGTCA CGGCGTTGCT GTTTGCCGGA CGCGCGGGCA CGTCGCTCAC GGCCGAGATC
GGTTTGATGC GCGCCGGCGA ACAGCTGTCG GCCATGGAAA TGATGGCCGT GGACCCGGTG
CGCCGCATCC TGGCGCCGCG CTTTTGGGGC GGCGTGATCG CCATGCCGCT GCTGGCACTG
GTGTTCAACG CGGTGGGTGT GATCGGTGGC TGGCTGGTCG GCGTGGTGCT CATCGGCGTG
GACGGCGGGG CGTTCTGGGG CCAGATGCAA AGCGGTGTCG ACGTCTGGAA GGACGTGGGC
AACGGCATCG TCAAGAGCCT CGCGTTCGGC GTGGCCGTCA CCTTCATCGC GGTGCTGCAG
GGCTTCGTGG CCAAGCCGAC GCCGGAAGGC GTCTCGCGCG CCACCACGCG CACGGTGGTG
ATGGCGTCGC TGTCCGTGCT GGGGCTGGAC TTCGTCCTCA CCGCCTTGAT GTTCAGTATC
TGA
 
Protein sequence
MSWWRPTHVG YAVRTKLADV GMGARLFARL LGLFGDVMRR PGLVRDQVHF LGNYSLSIIA 
MSGLFVGFVL ALQGYNVLQL YGSANSLGLV VTLGLVRELG PVVTALLFAG RAGTSLTAEI
GLMRAGEQLS AMEMMAVDPV RRILAPRFWG GVIAMPLLAL VFNAVGVIGG WLVGVVLIGV
DGGAFWGQMQ SGVDVWKDVG NGIVKSLAFG VAVTFIAVLQ GFVAKPTPEG VSRATTRTVV
MASLSVLGLD FVLTALMFSI