Gene Ajs_0748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0748 
Symbol 
ID4672219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp791607 
End bp792467 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content69% 
IMG OID639837871 
ProductABC transporter related 
Protein accessionYP_985068 
Protein GI121593172 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCCC CACCCTCATC GCCGGGCGAC GCCCTCGTGG AACTGCGCAA CGTCACCTTC 
GGGTACGGCG AGCGGGTGAT CCTGCGCGAC CTGTCGCTGG TCGTGCCGCG TGGCAAGGTC
ACGGCGCTGA TGGGTGCTTC GGGCGGGGGC AAGACGACGG TGCTGCGCCT CATTGGCGGC
CAGCAGCGCG CCCAGCAGGG CGAGGTGCTG GTGGGCGGCC AGGACGTAGG GCGCATGGAT
ACCGCACAGT TGTATGCCGC GCGCCGACGC ATGGGCATGC TGTTCCAGTT CGGCGCCTTG
TTCACCGACA TGAGCGTGTA CGAGAACGTG GCCTTTCCGC TGCGCGAGCA CACCGATCTG
CCCGAGGACC TGATCCGCGA CATCGTGCTC ATGAAGCTGC ATGCCGTGGG CTTGCGGGGA
GCGCGGGACT TGATGCCCAG CCAGATCTCC GGCGGCATGG CGCGGCGGGT TGCCCTGGCA
CGGGCCATTG CCCTGGACCC CGAGCTCATC ATGTACGACG AGCCGTTCGC CGGGCTTGAC
CCGATCTCGC TGGGTACTGC GGCGCAACTC ATCCGCCAAC TCAACGATGC CATGGGGCTG
ACCACCATCG TCGTCTCGCA CGATCTGGAA GAGACCTTCC GCCTGGCGGA CCACGTCATC
ATCCTGGGGC CCGGCACGGT GGCCGCCCAG GGCACGCCCG AAGAGGTGCG CGCCAGCACG
GATCCGCTGG TGCACCAGTT CGTGCACGCG CTGCCTACCG GGCCGGTGCC GTTCCACTAC
CCCGGCCCCA GCGTGGCCGA CGATTTCGGC CCCTTGCGCT CGCCCAGCGT GGACGCCCAC
GCCAGCGGAG GTACCCCATG A
 
Protein sequence
MSSPPSSPGD ALVELRNVTF GYGERVILRD LSLVVPRGKV TALMGASGGG KTTVLRLIGG 
QQRAQQGEVL VGGQDVGRMD TAQLYAARRR MGMLFQFGAL FTDMSVYENV AFPLREHTDL
PEDLIRDIVL MKLHAVGLRG ARDLMPSQIS GGMARRVALA RAIALDPELI MYDEPFAGLD
PISLGTAAQL IRQLNDAMGL TTIVVSHDLE ETFRLADHVI ILGPGTVAAQ GTPEEVRAST
DPLVHQFVHA LPTGPVPFHY PGPSVADDFG PLRSPSVDAH ASGGTP