| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0701 |
|---|
| Symbol | |
|---|
| ID | 4671187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | - |
|---|
| Start bp | 741860 |
|---|
| End bp | 742894 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 639837824 |
|---|
| Product | cytidyltransferase-like protein |
|---|
| Protein accession | YP_985021 |
|---|
| Protein GI | 121593125 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1051] ADP-ribose pyrophosphatase
[COG1056] Nicotinamide mononucleotide adenylyltransferase |
|---|
| TIGRFAM ID | [TIGR00125] cytidyltransferase-related domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.962082 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0273891 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGACA CCGCCATCCT CATCGGCCGC TTCGAGCCCG TCCACACCGG CCATCTCGCC
CTGCTGCGCG AAGCGCTGGT GCAGGCGCGG CAGGTCATCG TCATCGTCGG CTCGGCCTTC
CAGGCGCGCA CACCCAAGAA CCCGTTCACC TGGCACGAAC GCGAAGCCAT GCTGCGCGGT
GCTCTGCCCG AGGGCGACCG CACGCGCCTC ACCGTGCTGC CGGTGCGCGA CTACTACAAC
GAGGCGGTGT GGGTGGAAGC CGTGCGCAAT GCGGTGGCGC GCCACAGCCC GCCGCAGGCG
CGCGTGGGAC TGGTCGGCCA TTTCAAGGAC GCCACGAGCG GCTACCTCAG CGCCTTTCCG
GGCTGGGAAT TGATACGCAT GGAGCGCCAG GGCCGCATCG ACGCGACCGC CATCCGCGAC
GCCTACTTCG GCGCCACACC CGCCACCGTG GCCCACGCGC TGCAGCCGCT GGCGCCCATG
CTGCCGCCCG CCACGCAAGC GCTGTTGGAG CAGTTCGCCC ACACGCCGCA CTTCGCCACA
CTGCAGCAGG AATGGCAGAT GCTGCGCGGT TACCGCGCCG CCTGGGCAAC GGCGCCCTAC
CCGCCCGTGT TCGTGACCGT GGACGCGGTA CTGCGCTGCC AGGATCACGT GCTGCTCATC
CGCCGCGCCC ACGCACCAGG GCGTGGCCTG CTGGCGGTGC CCGGCGGCTT CATCGAACAA
CGCGAGACGC TGTGGCAGTC CTGCCTGCGT GAACTGGCAG AGGAAACGAA TTGCGCCCTG
CCCGAGGCCA CGCTGCGCGC GGCGCTGCGC AGTGTGACGG TGTTCGACCA CCCCGACCGC
AGCCAACGCG GCCGCACCAT CACCCACGCG CACTACTTCG ACCTGCAGGA CGCTCCGCTG
CCCCCGGTGC AGGCGGCTGA CGACGCGGCG CATGCCGAGT GGGTGGCCAT CGACCGGCTC
GCGGGCATGG AAGAAGCGTT CTTTGAAGAC CACTTCCACA TGCTGGACCA CTTCTTGCGC
CTCACAGTCC ACTGA
|
|---|
| Protein sequence | MYDTAILIGR FEPVHTGHLA LLREALVQAR QVIVIVGSAF QARTPKNPFT WHEREAMLRG
ALPEGDRTRL TVLPVRDYYN EAVWVEAVRN AVARHSPPQA RVGLVGHFKD ATSGYLSAFP
GWELIRMERQ GRIDATAIRD AYFGATPATV AHALQPLAPM LPPATQALLE QFAHTPHFAT
LQQEWQMLRG YRAAWATAPY PPVFVTVDAV LRCQDHVLLI RRAHAPGRGL LAVPGGFIEQ
RETLWQSCLR ELAEETNCAL PEATLRAALR SVTVFDHPDR SQRGRTITHA HYFDLQDAPL
PPVQAADDAA HAEWVAIDRL AGMEEAFFED HFHMLDHFLR LTVH
|
|---|
| |