Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0694 |
Symbol | |
ID | 4670764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 733087 |
End bp | 733932 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639837817 |
Product | RpiR family transcriptional regulator |
Protein accession | YP_985014 |
Protein GI | 121593118 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00592918 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTAGACC GCATCACCGC TTCCCTGCCC TCGCTCGCCC CCGCCGAGCA GCGCGTGGCC CAACTCGTGC TGGACGACCC GCGCGCCTTT GCCCACCTGC CGGTGCGCGA GCTGGCCGCG CGCGCGCGCG TCAGCAAGCC GACAGTGGTG CGCTTTTGCC GCAGCATGGG CTATGACGGC CTGGCGGACT TCAAGCTCAA GCTGGCCGGC AGTGTGAGCG AGGGCGTGCC CTTCATCCAC CGCAGCGTGG ACGCTGACGA CAAGACCAAC GACGTGCTGG TGAAGGTGGT GGACAACGCC GTGGCCGCCT TCCTGCAGTA CCGCAACGCC GCCAGTACCA ATGCGCTGGA GCGTGCGGCC GAGGCCATCG CCAGCACCTG GCAGACGGGG CGGCGCATCG AGTTCTACGG CGCGGGCAAC TCCGGCATCG TGGCGCAGGA CGCGCAGCAC AAGTTCTTTC GCCTAGGCAT CACCAGCATC TCCACCAGCG ACGGCCACAT GCAGGTGATG AGCGCCACGC TGCTGGGCCC GGGCGACTGC GCGGTGATCA TCAGCAACTC GGGCCGCACG CGCGACCTGA TGGACGCAGC CGACATCGCG CGCAAGAACG GCGCAACCAC CATTGCCATC ACCGCCAGCG GCTCGCCGCT GGCACACACC TGCCGCATCC ACCTGGCGGC CGACCACCCC GAGGGCTACG ACCGCTACAG CCCCATGGTC TCGCGCCTGC TGCACCTGCT CATCATCGAC GTGGTCGCCA CCTGCGTGGC GCTGCGCATC GGCGAGCCGC TGCAACCGGT GCTGCAGCAG ATGAAGAACA ACCTGCGGGC CAAGCGGTAT ACCTGA
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Protein sequence | MLDRITASLP SLAPAEQRVA QLVLDDPRAF AHLPVRELAA RARVSKPTVV RFCRSMGYDG LADFKLKLAG SVSEGVPFIH RSVDADDKTN DVLVKVVDNA VAAFLQYRNA ASTNALERAA EAIASTWQTG RRIEFYGAGN SGIVAQDAQH KFFRLGITSI STSDGHMQVM SATLLGPGDC AVIISNSGRT RDLMDAADIA RKNGATTIAI TASGSPLAHT CRIHLAADHP EGYDRYSPMV SRLLHLLIID VVATCVALRI GEPLQPVLQQ MKNNLRAKRY T
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