| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0672 |
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| Symbol | |
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| ID | 4671766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 709622 |
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| End bp | 710305 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 639837796 |
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| Product | hypothetical protein |
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| Protein accession | YP_984993 |
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| Protein GI | 121593097 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.142154 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.272491 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCGCCACC GTAGGCTGCG CGGCTTCACG CTGGTGGAGC TGCTCGTGGC CATCGCGGTA
ATGGCGCTGC TCGCCATCGC CAGCTGGCGC GGGCTGGACG GCATGGCGCG CTCGCAGCAG
CTCACGCGCG AGCGCACCGA CGAGCTGCTG GTGCTGCAGA CCGTGCTGGC CCAGTGGGCG
GCCGACCTGG ATGCCCTGCA GGCCATCGAC CATACCGAAC CCATCGCCTG GGACGGCCAG
GTGCTGCGCC TCACGCGGCG CGGCACGCGC CAGCCCGACG AGGGTGCGCT GGTCGTCGCC
TGGGCGCGGC GCAGCGTGGA CGGCACCGCC CGCTGGCTGC GCTGGCAGTC CCCGCCGGTG
CGCACCCGCG CGGAATGGAA TGCCGCCTGG CAGCGCGCAG CCCAGTGGGC GCGCACACCC
GGCGAGGCCG AGCGCCGACA GGAAACCGTG CTGATGCCGC TGGCCAATTG GCAGCTGTAC
TACTACCGCA GCGGCGCCTG GGCCAATGCG CTGTCCACCG ATACCAGCGC CAGCGCACCG
CGCACGGTCG GCGGGCTGAG CAGCGCCGCC GCCAGCATCC CCGACGGGGT GCGCCTGCAG
CTCACGCTGC CGCCGGGTGG CGCACTCTCG GGCGTGGTCA CGCGGGACTG GGCCAATCCG
CTGCTGGGTG GAGGCAAGTC GTGA
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| Protein sequence | MRHRRLRGFT LVELLVAIAV MALLAIASWR GLDGMARSQQ LTRERTDELL VLQTVLAQWA
ADLDALQAID HTEPIAWDGQ VLRLTRRGTR QPDEGALVVA WARRSVDGTA RWLRWQSPPV
RTRAEWNAAW QRAAQWARTP GEAERRQETV LMPLANWQLY YYRSGAWANA LSTDTSASAP
RTVGGLSSAA ASIPDGVRLQ LTLPPGGALS GVVTRDWANP LLGGGKS
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