Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0606 |
Symbol | |
ID | 4674692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 639108 |
End bp | 639698 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639837732 |
Product | tripartite ATP-independent periplasmic transporter DctQ |
Protein accession | YP_984929 |
Protein GI | 121593033 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.943331 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTCCC TACCTACCCC CGGGCCGGCC GACGATGCCG CCCCGGATGG CGCGCGCGTC TCTAGCGACC CCGCCTCCAG CGAACCACGT TCCCTGCGCA TCGAGGACTG GCTCACCGTC ATCGTCATGG CGCTGCTGGC GCTGATCACG TTTGCCAACG TGCTCGTGCG CTATTTCACC AATTCGTCCT TTGCCTGGAC CGAGGAGCTC TCGGTCTTCC TGATGATCGT GCTGGCCCTG GTGGCTGGCT CTGCCGCGGT GGCGCGCGAC CGCCACATCC GCATCGAATT CTTCTGCGAC AGCGGCTCCG CAGCCCGCCG CCGCCGGTTG GCACAACTGG GCGCACTGCT GGTGGCCGTG CTGTTCGCGG TGATCGCCGT GCTCAGCGTG CGCGTGGTCT GGGACGACTA CCGCTTCGAA GAAACCTCGC CCGGCATCGG CGTGCCGCAG TGGTGGTACT CGGTCTGGCT GCCCATCCTC TCGCTGCTCA TCACCTGGCG CGCCATTGGC CTGCTGATCC GCCGCACGCG CCAGCCGGAC GTGGAGTTTC TCGGCAATGA CGCAGACGAC AACGGAGAGC GCCAGCCATG A
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Protein sequence | MSSLPTPGPA DDAAPDGARV SSDPASSEPR SLRIEDWLTV IVMALLALIT FANVLVRYFT NSSFAWTEEL SVFLMIVLAL VAGSAAVARD RHIRIEFFCD SGSAARRRRL AQLGALLVAV LFAVIAVLSV RVVWDDYRFE ETSPGIGVPQ WWYSVWLPIL SLLITWRAIG LLIRRTRQPD VEFLGNDADD NGERQP
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