Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0604 |
Symbol | |
ID | 4674080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 636748 |
End bp | 637779 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639837730 |
Product | TRAP dicarboxylate transporter, DctP subunit |
Protein accession | YP_984927 |
Protein GI | 121593031 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.639711 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTTC GCACTTTCCT CACTTCCGCC GTCGCCGCTG CTGCGGCCCT TGCCTTCGGC ACACCCGCGC TGGCGCAGAA CTACAAGAGC GAATACCGCA TGTCGCTGGT ACTGGGCACC GCCTTCCCGT GGGGCAAGGG CGGCGAGATC TGGGCACAGA AGGTCAAGGA GAAAACCCAG GGCCGCATCA ACATCAAGCT CTACCCGGGC GTGTCGCTGA TCCAGGGCGA CCAGACACGT GAGTTTTCCG CGCTGCGCCA GGGCGTGATC GACATGGCTG TGGGCTCCAC CATCAACTGG TCGCCCCAGG TGAAGGCGCT GAACCTGTTC TCGCTGCCCT TCCTGTTCCC CGACTACGCG GCTGTCGATG CGGTCACACA GGGCGAAGTC GGCAAGAGCA TCTTTCAGAC GCTGGAAAAG GCCGGCGTGG TGCCACTGGC CTGGGGTGAG AACGGCTACC GCGAGATCAG CAACTCCAAG CACGCCATCA AGAGCCCCGC CGACCTCAAG GGTCTGAAGA TCCGCGTGGT GGGCTCGCCC CTGTTCCTCG ACACCTTCAC CGCGCTGGGC GCCAACCCCA CGCAGATGAG CTGGGCCGAC GCACAGCCCG CCATGGCCAG CGGCGCCGTG GACGGCCAGG AGAACCCCAT CGCCGTGTAC CAGGCCGCCA AGCTGCACAC CGTGGCACAG AAGCACGTGA CCATGTGGGG CTACATGAAC GACCCGCTGA TCTTCGTGGT GAACAAGGAC GTGTGGAACA GCTGGACGCC CGCCGACCGC GAAGCCGTCA AGCAAGCCGC CATCGAAGCC GGCAAGGAAG AAATTGCCAT CGCGCGCAAG GGCATGGTCG AGGCCGACAA GCCCCTGCTC AAGGACATCG CCGCCAATGG CGTGACCGTG ACGCAGCTGA GCCCCGCCGA GCGCGACGCC TTCGTGAAGG CCACGCGCCC CGTGTTCGAG AAGTGGAAGG GCCAGATCGG CGCCGACTTG GTGAGCGCAG CCGAGAAGGC GATTGCGGCG CGCAAACAGT AA
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Protein sequence | MKLRTFLTSA VAAAAALAFG TPALAQNYKS EYRMSLVLGT AFPWGKGGEI WAQKVKEKTQ GRINIKLYPG VSLIQGDQTR EFSALRQGVI DMAVGSTINW SPQVKALNLF SLPFLFPDYA AVDAVTQGEV GKSIFQTLEK AGVVPLAWGE NGYREISNSK HAIKSPADLK GLKIRVVGSP LFLDTFTALG ANPTQMSWAD AQPAMASGAV DGQENPIAVY QAAKLHTVAQ KHVTMWGYMN DPLIFVVNKD VWNSWTPADR EAVKQAAIEA GKEEIAIARK GMVEADKPLL KDIAANGVTV TQLSPAERDA FVKATRPVFE KWKGQIGADL VSAAEKAIAA RKQ
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