Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0539 |
Symbol | |
ID | 4673154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 560620 |
End bp | 561504 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639837668 |
Product | glucose-1-phosphate thymidylyltransferase |
Protein accession | YP_984865 |
Protein GI | 121592969 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.911631 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.057049 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACAC GCAAAGGCAT CATCCTCGCC GGCGGCTCCG GCACCCGTCT GCACCCGGCC ACGCTGGCCA TCAGCAAGCA ACTGCTGCCG GTGTACGACA AGCCCATGAT CTACTACCCG CTCAGCACGC TGATGCTGGC GGGCATCCGC GACATCCTCA TCATCAGCAC GCCGCAGGAC ACCCCGCGGT TCGAGCAACT GCTGGGTGAC GGCAGCCAAT GGGGCCTCAA CCTGCAATAT GCCGTGCAGC CCAGCCCCGA CGGCCTGGCC CAGGCCTTCC TGATCGGCGA GCGGTTCCTG AATGGCGCGC CCAGCGCCCT GGTGCTGGGC GACAACATTT TTTACGGCCA CGACTTCCAT GAGCTGCTGG CCAATGCCAA CGCCCGCACC GAGGGCGCCA GCGTCTTTGC CTACCACGTG CACGACCCCG AGCGCTACGG CGTGGCCGAG TTCGACGCCC AGGGCAGGGT GCTGTCGCTC GAAGAAAAGC CGCAGGCCCC CAAGTCCAAC TACGCCGTCA CCGGCCTGTA CTTCTACGAC GCGCAGGTGG TGGAGCTGGC CAAGGGCCTC CAGCCCTCGC CGCGCGGCGA GCTGGAGATC ACCGACCTGA ACCGGCTGTA CCTCGAACAA GGCCTGTTGC AGGTGGAAAT CATGGGCCGC GGCTATGCCT GGCTGGACAC CGGCACGCAT GAAAGCCTGC TCGAGGCGGG TCAGTTCATC GCCACGCTTG AGAATCGGCA AGGATTGAAA ATCGCCTGCC CCGAGGAAAT CGCGTGGCGC CATCGGTGGG TCGATGCCGC GCAACTGGAG CGCTTGGCAC AGCCATTGAC CAAGAATGGT TATGGGAAGT ATCTGATGCG CATTTTGAAC GAAAAAATCT ATTGA
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Protein sequence | MTTRKGIILA GGSGTRLHPA TLAISKQLLP VYDKPMIYYP LSTLMLAGIR DILIISTPQD TPRFEQLLGD GSQWGLNLQY AVQPSPDGLA QAFLIGERFL NGAPSALVLG DNIFYGHDFH ELLANANART EGASVFAYHV HDPERYGVAE FDAQGRVLSL EEKPQAPKSN YAVTGLYFYD AQVVELAKGL QPSPRGELEI TDLNRLYLEQ GLLQVEIMGR GYAWLDTGTH ESLLEAGQFI ATLENRQGLK IACPEEIAWR HRWVDAAQLE RLAQPLTKNG YGKYLMRILN EKIY
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