Gene Ajs_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0539 
Symbol 
ID4673154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp560620 
End bp561504 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content63% 
IMG OID639837668 
Productglucose-1-phosphate thymidylyltransferase 
Protein accessionYP_984865 
Protein GI121592969 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1209] dTDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01207] glucose-1-phosphate thymidylyltransferase, short form 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.911631 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.057049 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAC GCAAAGGCAT CATCCTCGCC GGCGGCTCCG GCACCCGTCT GCACCCGGCC 
ACGCTGGCCA TCAGCAAGCA ACTGCTGCCG GTGTACGACA AGCCCATGAT CTACTACCCG
CTCAGCACGC TGATGCTGGC GGGCATCCGC GACATCCTCA TCATCAGCAC GCCGCAGGAC
ACCCCGCGGT TCGAGCAACT GCTGGGTGAC GGCAGCCAAT GGGGCCTCAA CCTGCAATAT
GCCGTGCAGC CCAGCCCCGA CGGCCTGGCC CAGGCCTTCC TGATCGGCGA GCGGTTCCTG
AATGGCGCGC CCAGCGCCCT GGTGCTGGGC GACAACATTT TTTACGGCCA CGACTTCCAT
GAGCTGCTGG CCAATGCCAA CGCCCGCACC GAGGGCGCCA GCGTCTTTGC CTACCACGTG
CACGACCCCG AGCGCTACGG CGTGGCCGAG TTCGACGCCC AGGGCAGGGT GCTGTCGCTC
GAAGAAAAGC CGCAGGCCCC CAAGTCCAAC TACGCCGTCA CCGGCCTGTA CTTCTACGAC
GCGCAGGTGG TGGAGCTGGC CAAGGGCCTC CAGCCCTCGC CGCGCGGCGA GCTGGAGATC
ACCGACCTGA ACCGGCTGTA CCTCGAACAA GGCCTGTTGC AGGTGGAAAT CATGGGCCGC
GGCTATGCCT GGCTGGACAC CGGCACGCAT GAAAGCCTGC TCGAGGCGGG TCAGTTCATC
GCCACGCTTG AGAATCGGCA AGGATTGAAA ATCGCCTGCC CCGAGGAAAT CGCGTGGCGC
CATCGGTGGG TCGATGCCGC GCAACTGGAG CGCTTGGCAC AGCCATTGAC CAAGAATGGT
TATGGGAAGT ATCTGATGCG CATTTTGAAC GAAAAAATCT ATTGA
 
Protein sequence
MTTRKGIILA GGSGTRLHPA TLAISKQLLP VYDKPMIYYP LSTLMLAGIR DILIISTPQD 
TPRFEQLLGD GSQWGLNLQY AVQPSPDGLA QAFLIGERFL NGAPSALVLG DNIFYGHDFH
ELLANANART EGASVFAYHV HDPERYGVAE FDAQGRVLSL EEKPQAPKSN YAVTGLYFYD
AQVVELAKGL QPSPRGELEI TDLNRLYLEQ GLLQVEIMGR GYAWLDTGTH ESLLEAGQFI
ATLENRQGLK IACPEEIAWR HRWVDAAQLE RLAQPLTKNG YGKYLMRILN EKIY