| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0529 |
|---|
| Symbol | |
|---|
| ID | 4672983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 552918 |
|---|
| End bp | 553493 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639837658 |
|---|
| Product | D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase |
|---|
| Protein accession | YP_984855 |
|---|
| Protein GI | 121592959 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0241] Histidinol phosphatase and related phosphatases |
|---|
| TIGRFAM ID | [TIGR01656] histidinol-phosphate phosphatase family domain
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.036293 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCG CCATCCTGGA CCGAGACGGA ACGCTCAACG CGCTGGGCGA TGGCTTCATC
GCCTCGCCCG ACGAATGGGT GCCGGTGCCT GGCGCGCTGG AGGCCGTGGC GCGGCTGAAC
CACGCGGGCT GGCATGTGGT GGTGGCCACC AACCAGCCGG GCCTGGGCCG CGGCCTCTTC
GATGCGCAGA CCCTGGTGGC CATCCACGCG AAGATGCACC GGCAGCTGGC CACGCTGGGT
GGGCGCATCG ACGCGGTGTT CTACTGCCCC CACACCGAGA GCGAGCAATG CCGCTGCCGC
AAGCCCGCTC CGGGCCTGAT GGAGCAGATC CGCGATCGCT ACGGCGCGGA GGGGCAGGAA
ATTCTGGTGG CGGGCAGCAG TGCGGCCCAC CTGCAGGCGG CGAGCGAGCT GGGCGCGCAA
CTGCACATGG TCTGCACCGG TCGCTCGGCC CACCTGGACC CGCGCCAGAG CCTGCCGCCC
GGCTGGCCCG CCGGCACGCG CGCCCATGCC AGCCTGGGCG CGCTGGCGGA TTTCATCGCC
CCGCAGAACG GCGCCAGCCT GCCCGTGGCC CTGTGA
|
|---|
| Protein sequence | MKLAILDRDG TLNALGDGFI ASPDEWVPVP GALEAVARLN HAGWHVVVAT NQPGLGRGLF
DAQTLVAIHA KMHRQLATLG GRIDAVFYCP HTESEQCRCR KPAPGLMEQI RDRYGAEGQE
ILVAGSSAAH LQAASELGAQ LHMVCTGRSA HLDPRQSLPP GWPAGTRAHA SLGALADFIA
PQNGASLPVA L
|
|---|
| |