| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0514 |
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| Symbol | |
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| ID | 4673189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 534129 |
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| End bp | 536435 |
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| Gene Length | 2307 bp |
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| Protein Length | 768 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639837643 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_984840 |
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| Protein GI | 121592944 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.400369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0201615 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTCCT CCTCCCCTCT CAAGAAGCCC AAGAGCCTGC GCATGGCCGC AGCCCTGCTG
CCGCTGAGCG CCATCGCCCA GGTGCAGCCC ACGCCCGCCC CCGTCACCAC GCTGCCCACG
GTGACGGTGC AGGAGCAGGC CATCGATCCC AACCCCAACG CCGAGGTCGG CGCGCCCTAC
AAGGCCAAGA CCTCCGCCGA CACGCGCCAC ACCCGCCCGC TGGCCGAGAC GCCGCAGACC
ATCCAGGTGG TCACCGGCGA GGCCATCCGC GACTCCGGCG CCACCGACCT CAAGCAGATC
CTGGCCGCGC AGCCCGGCAT CACCCTGGGC ACGGGCGAAA ACGGCAACGC CTTTGGCGAC
CGCTACATCA TCCGCGGCCA GGAGGCGCGC TCGGACGTGT TCGTGGACGG CCTGCGCGAC
CCCGGCATGA CCACGCGCGA GAGCTTCGCC ATCGAGCAGG TGGAAGTCAC CAAGGGCCCC
AACTCCAGCT TCGCGGGCCG CGGCTCGGCG GGCGGCGCGG TGAACGCCGT GACCAAGCAG
GCCACGCTGG ACTATGACTT CACCCGCGTG TCCGCCGGCG TGGGCACCGA CAGCCACCAC
CGCGTGACGC TGGACATGAA CAAGGGCTTC ACCGACAAGT TCGCCCTGCG CGCCAACGCC
CTGACCTCGG GCGAGGACGT GCCGGGCCGC AGCCCCTCGC AGCGCCGCCG CGACGGCCTG
GCGCTGTCGG GCCTGTGGGA GCTGAACCAA GACCTGTCCG TCACGCTGGA CTACTACGGC
CTGCGCGCCA AGGACAAGCA TCCCGACCTG GGCGGCTACC TCGTGGGCAC GGTGCCCAAC
CGCCGCCCCG CCACGGGTGT GCCGGTCTAT GCGCAGAACA GCGACTTCCT GAATTCCGAC
GTGGACACGG TCACCGCGCG CATCGCCTAC CGCTTTGCGC CCGACCTCAA ACTCACCAGC
CTGACGCGCT ACGGCCAGTC GGACAACCGC TACGCCACCA CGGGAGCCTC CAACGGCACG
GTGCTGGACG CGGCCAACAA CCCGATCGGC ACGGCCGGCG TGCTGGACGG TGGCCACACC
GGCTGGCAGG ACGTGAAATA TTTCGCGCAC CAGAGCAACC TGCGCTGGGA CAAGCAGATC
GGCAGCCTCA AGCATGAATT CATCTTCGGC TTCGAATACA CCGACCACAA GGTGAAGTCC
GGCAACTACG GCGTGACCAA CACCGGCGCC ACCAACTGCC GCGTTTCGGG CCGCAACGGC
CCGCAGGCCG GCTGGTGCAT CACTGATCTG AACGGCAACC CCGTGAGCAA CCTGGGCGAC
CTGGCCGGCC GCAGCTACGA ACGCCGCAGT TGGACACGCG ACTGGCGCGT GAAGACCTTC
GCGCTGTCGG CCATGGACAC GGTGGACCTG ACCGACCAGT GGACCGTGTT CGGCGGCCTG
CGCGCCGACC ACTACGACCT GTCGCTGGAC ACCCGCAACA ACCAGACGGG CGCGATCACG
GGCAACTACG GCTTCAACGA CACACTGCTC AACGGCCACC TGGGTGTGAG CTACAAGATC
AACCCCATGG GTATGGTCTA TGCAAGCTAC GGCACGGCGC AGGACATCAA CGGCGGCGAA
CCCGACACCG GCACGAGCAG CGGCTACGGC GGCCTGGTGA TCCACAACGG CAGCGCCGCC
GGCGCCAAGC CCGAGACCTC GCAGAACATC GAGCTGGGCA CCAAGTGGAA CCTGCTGGAC
GACAAGCTGC TGGCCACCGC CGCCGTGTTC CAGACCACCA AGGACGACGT GATGGAGGGT
GCCAACTACG ACACTGAAGG CACCTTCAAC ACCGGCAAGA ACCGCGTGCG CGGCATCGAA
CTGGGCCTGG CCGGCAATCT CACCAAGAAC TTCCAGCTGC AAGCCGGAGC GGCGATCATG
AAATCCAAGG TGCTGCGCTC GGCCGTGGCG TCCAACGTGG GCAACCCGCT GTCCAACTTC
GCCGACCGCT CCTTCACCGT ACAGGGCAAG TACCAGCTCA CGCGCGACTT CTCCTTCGGC
GCCGTGGCGC GCTACGAGAG CAGCCGCTGC GGCGGCCAGC CCGACACCGG TGCCGGCTAC
ACCAACGGCA TGTGCTCGCA GCCGGTGCCC TCGTTCAGCG TGTACGACCT GTTCGCGTCC
TACCGCATCA ACAAGCACGC CGACCTGCGC CTGAACGTGC TGAACGTGAC CGACAAGGAC
TACTACACCG CCGTGTACCG CTCGGGCGCC TTCCTGTACA AGGGCGACGG CCGCGCAGTG
CGCCTGACGT TGAACCTGGA CTTGTAA
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| Protein sequence | MPSSSPLKKP KSLRMAAALL PLSAIAQVQP TPAPVTTLPT VTVQEQAIDP NPNAEVGAPY
KAKTSADTRH TRPLAETPQT IQVVTGEAIR DSGATDLKQI LAAQPGITLG TGENGNAFGD
RYIIRGQEAR SDVFVDGLRD PGMTTRESFA IEQVEVTKGP NSSFAGRGSA GGAVNAVTKQ
ATLDYDFTRV SAGVGTDSHH RVTLDMNKGF TDKFALRANA LTSGEDVPGR SPSQRRRDGL
ALSGLWELNQ DLSVTLDYYG LRAKDKHPDL GGYLVGTVPN RRPATGVPVY AQNSDFLNSD
VDTVTARIAY RFAPDLKLTS LTRYGQSDNR YATTGASNGT VLDAANNPIG TAGVLDGGHT
GWQDVKYFAH QSNLRWDKQI GSLKHEFIFG FEYTDHKVKS GNYGVTNTGA TNCRVSGRNG
PQAGWCITDL NGNPVSNLGD LAGRSYERRS WTRDWRVKTF ALSAMDTVDL TDQWTVFGGL
RADHYDLSLD TRNNQTGAIT GNYGFNDTLL NGHLGVSYKI NPMGMVYASY GTAQDINGGE
PDTGTSSGYG GLVIHNGSAA GAKPETSQNI ELGTKWNLLD DKLLATAAVF QTTKDDVMEG
ANYDTEGTFN TGKNRVRGIE LGLAGNLTKN FQLQAGAAIM KSKVLRSAVA SNVGNPLSNF
ADRSFTVQGK YQLTRDFSFG AVARYESSRC GGQPDTGAGY TNGMCSQPVP SFSVYDLFAS
YRINKHADLR LNVLNVTDKD YYTAVYRSGA FLYKGDGRAV RLTLNLDL
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