Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0429 |
Symbol | |
ID | 4671443 |
Type | |
Is gene spliced | No |
Is pseudo gene | Yes |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 435092 |
End bp | 437343 |
Gene Length | 2252 bp |
Protein Length | |
Translation table | |
GC content | 72% |
IMG OID | 640068290 |
Product | |
Protein accession | |
Protein GI | |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGTGCCAT GGGTGCGGCC TGGGCCTGGG CGGGCGGCCG CCTTGCAGTA CCTGCCCCTG GAGCCGCAGG CGCTGCAGTC CCTGCTGCAG TACAAGAGCG GGCTGGACGC CGTGCTGGCG GGTGCTCTGC TGGGCTGGCT CCTGCTGCGC TGGCGCCGGG GCGGGAGCCG GCGCACCCTG GCGCGCCGGG TGGAGCAGGT GCTGCGCCAC GCGCCCGCCG GCATGGCGCG GCTGAGCATG GACGGCCGCC TGGTGTGGGC CAATGAACGC CTGCGTGAAT GGCTGGGCGT GGCGCCGCAC GAGCCGCTGC CGCAGGTCGA CTTCCGAACG CTGGTGCGCC CGCACGACAG CGATTGGGCG CAGCGGCAAC TGCAGCGGCT GCGCGCCGGC GAGATCGACC ATTACCAGGG CGAGCGCTGG TGCCGCAACC AGCGCGATGG ATCGCAGCTG CCCGTGCTGT GCACCGTGAG CCATGTGCTG GCCCTGGAGA GCGAGCCCGA CCACCTGGTG TGCGTACTGC AGTCCCTGCG CGAAGTGCAT GCCGCGCGCG ACGCGCAGGC GCTCAGCGAA CAGCGCTGGC GCTTGGCGGC CACGGTGGTG GACAACACCA TCGAAGGCGT GGTGGTCACC GATGCCGACG GCCGCATCCT CTCGGTCAAC CCGGCCGTCA CGCGGCTCAT GGGCTATACC GAGGAAGAGT TGCTGGGCCA GAACCCGCGC GTGTTCAAGT CGGGGCGGCA TGGACCGGCG TTCTACGAGG CCATGTGGGA CACCATGCGC CAGACGGGCC ACTGGCAGGG GGAGATATGG AACCGGCGCA AGAACGGCGA GGTGTTCCCG GAGCGCATGT CGCTCTCGGC CGTGCGCGGC GCGGACGGCG CGGTGACGCA CTACGTGTGC ATGTTCACCG ACATCTCCGA GGAAAAGGCC CAGCACCAGC GCCTGGAGTT CCTGGCGCAC TGCGACCCGC TGACCGGCCT GCCCAACCGC GCCTGGTTTG GCGAGCAGCT CGACAGCGCC GTGCGCCAGG CACAGGACAG CGGCGAGCAG ATGGCCCTGC TGCTCCTGAA CCTGGACCGC TTCAAGGACG TGAACGACAG CTACGGCCAC GCCGTGGGCG ACGAGGTGCT CAGGCACACA CCCGCCAGGT GGAGCAGAGC CTGCGCCCGG GCGATCTGCT GGGGCGGCTG GCCGGCGACG AGATCGCCGT GCTGGCCCGC CACCTGCGCC ATGCGGACGG CGCGGCAGCC GTGGCGCGGC ACCTGATCGC CGCGGCCAGC ACGCCCTGGT GCACGCCCGA TGGCATCGAG GTGGTGGTGG GCGTGAGCGT GGGCATCTGC ATGTTCCCCG GGCATGCGCG GACCACCGAG GCGCTGCTGC AGGGCGCGCA TTCCTCGGTG TACGGCGCCA AGGCCCGCGG GCGCGGCGCG TATTGCTTCT TTGACGAATC GCTCATTCAG GCCGCGCGCG AGCGCCTGGA GATCGAGGCG CGGCTGCGCG TGGCCCTGGC GCAGGGGCAC CTGCGGCTGT ACTACCAGCC GCAGGTATGC ATCGCCACCG GCCGGATCAT GGGGGCCGAG GCGCTGGTGC GCTGGCTGGA CCCGCAGGAG GGCATGATCT CGCCCGCGCG CTTCATCCCC GTGGCCGAGA CCTCGGGCGT GATCGGCCCG CTGGGCCAGT GGGTGATGCG CGCCGCCTGC GAGCAGGGCC AACGCTGGCG CGCCGACGGC CTGCCGGAGA TCCGCCTGGC CATCAACCTC TCGCCGCGCC AGTTCCAGTT GACCGACGTG GCCGCCTGCG CCGGCGAGGC GCTCAAGGCC AGCGGCTTCC CGGCCCGCTG CCTGGAGCTG GAACTGACCG AGTCGGTGCT GGCCGAGCGG CCCGACGAGA TCCGCGCCGT GCTGCAGCGG CTGCAGCAGC TGGGCGTGCG CATGGCGGTG GACGACTTCG GCACCGGCTA TTCGTCCCTG GCGCACCTCA AGCGCTTTCC CATCGACGTG CTCAAGATCG ATCAGGGCTT CATCCGCGAC ATTCCCCGCA GCGCCGACGA CATGGCCATC AGCGCCGCCA TCGTTGCCAT GGGGCACAGC CTGGGGCTGT CGGTGCTGGC CGAGGGGGTG GAGACGCCGC AGCAGCTGGC GTTCCTGCGC GAGCGCGGCT GCGACGCCTA CCAGGGCTAC CTGTGCAGCC GCCCCCTGCC GGCGGAGGAG TTCGCCCGGC TGCTGCAGGC GCACAACGGC ATGGCGGGCT GA
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Protein sequence | |
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