Gene Ajs_0380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0380 
Symbol 
ID4671191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp392732 
End bp393604 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content69% 
IMG OID639837510 
Product4-hydroxybenzoate octaprenyltransferase 
Protein accessionYP_984708 
Protein GI121592812 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID[TIGR01474] 4-hydroxybenzoate polyprenyl transferase, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCTG TCGCCCCGCG CTCCCGCCTG TCCCTGTACC TCGACCTGAT CCGCTGGAAC 
CGCCCCGCGG GCTGGCTGGT GCTGGTGTGG CCCACGCTGG CGGCGCTGTG GGTGGCGGCG
GACGGCTTTC CAGGCTGGCA CCTGCTGGCG GTGTTCGTGG CCGGCACGGT GCTCATGCGC
AGCGCCGGTT GCACCATCAA CGACATTGCC GACCGCGACT TCGACCGCCA TGTGAAGCGC
ACCACGCAGC GCCCCATCAC CAGCGGCCAG CTGGGCGTGA GGGAGGCCGC GCTGGTGGGC
GTGGTGCTCA CGCTGGTGGC TTTCGTGCTG GTGCTCACCA CGCGCTGGGA GGCGGTGGCC
TGGTCGGTGC CCGCGGTGTT GTTCACCATC CTGTACCCGT TCACCAAGCG GTTCTTCGCC
ATGCCGCAGG CGTTCCTGGG CATTGCGTTC AACTTCGGCA TCGTGATCGC CTTTGCGGCC
GTGCAGGGCC GGGTGCCTGC CACGGCCTGG GTGCTGTGGC TGGCCAACCT GTTCCTGGTG
CTGGCCTACG ACACCGAGTA CGCCATGGTG GACCGCGACG ACGATCTGAA GATCGGCATG
AAGACCTCGG CCATCACGCT GGGGCGCTTC GACGTGGCGG CCATCATGGG CTTCTTCGTG
CTGTGCCTGG GGCTCACGGC GTGGGTGCTC GCGCCCTACG GCCTGGGCTG GCCGCTGTGG
CTGGGGCTGG GCGTGGCGGC GGCGCAGGTG GCATGGCACT TCACGCTGAT CAAGGACCGC
ACGCGCGAGG GGTGCTTTAC CGCCTTCAGC AAGAGCCACT GGATCGGCGC GGCGATCTTT
GCCGGCGTGG CGCTAGGGTA TTTGCTACGC TAG
 
Protein sequence
MSAVAPRSRL SLYLDLIRWN RPAGWLVLVW PTLAALWVAA DGFPGWHLLA VFVAGTVLMR 
SAGCTINDIA DRDFDRHVKR TTQRPITSGQ LGVREAALVG VVLTLVAFVL VLTTRWEAVA
WSVPAVLFTI LYPFTKRFFA MPQAFLGIAF NFGIVIAFAA VQGRVPATAW VLWLANLFLV
LAYDTEYAMV DRDDDLKIGM KTSAITLGRF DVAAIMGFFV LCLGLTAWVL APYGLGWPLW
LGLGVAAAQV AWHFTLIKDR TREGCFTAFS KSHWIGAAIF AGVALGYLLR