| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0351 |
|---|
| Symbol | |
|---|
| ID | 4672028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 360022 |
|---|
| End bp | 360507 |
|---|
| Gene Length | 486 bp |
|---|
| Protein Length | 161 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639837482 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_984680 |
|---|
| Protein GI | 121592784 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1569] Predicted nucleic acid-binding protein, contains PIN domain |
|---|
| TIGRFAM ID | [TIGR00305] probable toxin-antitoxin system toxin component, PIN family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCCTG AGCTGCGCCT GCCCGCCGTG GCGCCGGCGG GCGAGAGCGC GCGTGCCGTG
GTGCTGGACA CCAACATCGT GCTCGACCTG TTCATCTTCG CCGACGCGGC CGTGGCCACC
GTGCGTGCGC TGCTGCAGGC CCAGCGCCTG GACTGGATTG CCACGCAGCA CATGCGGGAC
GAGCTGGAGC GCGTGCTGCA GTACACCCAC CTGCAGCCGC GCATGGCGTA TTACGGCGTG
GGCGCAGGTG ACGTACTGAC GGCGTTCGAC GCGGGCGTGC GCCTGGTCGA GGTGGCGCCG
CGCGCGCCCT GGGCCTGCAA GGACGCGGAC GACCAGAAGT TCATCGACCT GGCGGTCGCG
CACCGCGCCA TCATTGTGTC CAAGGACAAG GCTGTGCTTT GCATGCGAAA ACGGCTGTTG
ACGCAGGACA CGCATGCGGT GGCAGCTATT GTTTTTGAAG AGGTTTGCGA ACCATGTCCA
ACCTGA
|
|---|
| Protein sequence | MRPELRLPAV APAGESARAV VLDTNIVLDL FIFADAAVAT VRALLQAQRL DWIATQHMRD
ELERVLQYTH LQPRMAYYGV GAGDVLTAFD AGVRLVEVAP RAPWACKDAD DQKFIDLAVA
HRAIIVSKDK AVLCMRKRLL TQDTHAVAAI VFEEVCEPCP T
|
|---|
| |