Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0285 |
Symbol | rplP |
ID | 4672985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 297117 |
End bp | 297533 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639837416 |
Product | 50S ribosomal protein L16 |
Protein accession | YP_984615 |
Protein GI | 121592719 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0197] Ribosomal protein L16/L10E |
TIGRFAM ID | [TIGR01164] ribosomal protein L16, bacterial/organelle |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.931697 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0000000330456 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCTGCAAC CTGCTCGCCG CAAGTTCCGT AAGGAGCAAA AAGGCCGCAA CACCGGCGTT GCCACGCGTG GCAATTCGGT GGCTTTCGGT GACTTCGGTC TGAAGTGCAC GGATCGTGGC CGTCTGACGG CCCGCCAGAT CGAGGCCGCA CGCCGTGCGA TCTCCCGCCA CGTCAAGCGT GGTGGCCGTA TCTGGATCCG CGTGTTCCCC GACAAGCCGA TCTCTACCAA GCCCGCTGAA GTGCGTATGG GTAACGGTAA GGGCAACCCC GAGTACTACG TGGCTGAGAT CCAGCCCGGC AAGGTGGTGT TCGAGATCGT TGGCGTGCCT GAAGAACTGG CCCGCGAAGC GTTCCGCCTG GCAGCCGCCA AGCTGCCGCT GCGCACCACG TTCGTTGCCC GTCAGATTGG CGCCTAA
|
Protein sequence | MLQPARRKFR KEQKGRNTGV ATRGNSVAFG DFGLKCTDRG RLTARQIEAA RRAISRHVKR GGRIWIRVFP DKPISTKPAE VRMGNGKGNP EYYVAEIQPG KVVFEIVGVP EELAREAFRL AAAKLPLRTT FVARQIGA
|
| |