| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0261 |
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| Symbol | |
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| ID | 4672368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 275424 |
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| End bp | 276992 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639837392 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_984591 |
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| Protein GI | 121592695 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00135195 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACCGCAC CCGCACACAC ACCGCCGCTG CCGCCGCCAC CCCTCACGGG CAGCGCCCGG
CTGTGGGGCA CGCTGGCCCT GTCGGCGGCC ACCTTCATGA ACGTGCTGGA CACGTCGATC
GCCAACGTGT CCCTGCCCGC CATCGCGGGC GACCTGGGCG TGAGCCCCAC CCAAGGCACC
TGGGTGATCA CCAGCTTTGC CGTGGCCAAT GCCATCGCGG TGCTGCTCAC GGGTTGGCTG
TCGCAGCGCT TCGGGCAGGT GCGCCTGTTC GTGGCGAGCG TGGCGCTGTT CGTGATCGCG
TCGCTGCTGT GCGGCCTGGC GCCCAACATG ACGCTGCTCA TCGCCGCGCG CGCGCTGCAG
GGCTTCGTGG CGGGGCCGAT GATCCCGTTG TCGCAGTCGC TGCTGCTGTC CAGCTACCCG
CGCGCGCTGG CGGGGCTGGC CATGGCCATG TGGTCCATGA CCACGCTGAT CGCGCCGGTC
ATGGGGCCGC TGCTGGGCGG TTGGATCACC GACAACATGA CCTGGCCGTG GATCTTCTAC
ATCAACGTGC CCGTGGGCAT TGCCGCCGTG GTGGTCACCT GGGGCATCTT CCACCAGCGT
GAGACCGAGC GGCGCGCGCT GCCCATCGAC TCCATCGGCC TCGCGCTGCT CGTGATCTGG
GTGGGTGCCA TGCAGGTCAT GCTGGACATC GGCAAGGAGC ACGACTGGTT CGAGTCGCCC
TGGGTGGTGG CCTGCGGCCT GGTCGCGCTC GTGGGCCTGG TGGCCTTCGT GGTCTGGGAG
CGTGGCGAGG ACCACCCCGT GGTGGACCTG GCGCTGTTTC GCATCCGCAA TTTCTGGGCC
GGTGCGCTGG CCACCTCCGT GGGCTACGGG CTGTTCTTCG GCAACGTGGT GCTGCTGCCG
CTGTGGCTGC AGCAGTACAT GGGCTACACC GCCACGCAGG CCGGCGAGGT GATGGCGCCC
GTGGGGCTGC TGGCCATGGT GCTGTCGCCC CTGGTGGGCA AGAACATCGC CAAGGTGGAC
CCGCGCCGCT TTGCCACGCT GGCCTTCCTG GTGTTTGCGC TGGTGCTGTG GATGCGCTCC
AATTTCAACA CCCAGGCAGA CCTCGCCACC ATCATGGTGC CCACCATCAT CCAGGGCGTG
GCGATGGCGT TCTTCTTCAT CCCGCTGGTC ACGATCACGC TGTCGGGCAT TGCGCCCGAC
CGCATCCCGG CGGCCTCGGG GCTGTCGAAC TTCATGCGCA TCACGGCCGG CGCGGTGGGT
ACGTCCGTCA CCACCACGCT GTGGGAGCGG CGCGCCAGCC TGCACCATGC CCAGCTGACT
GAAGGCCTGC ACCAGGGCCA CCTGCCCTTC ACGCAGGCGC TGCAGGGCCT GCAGGCCGGG
GGTCTCACGC CCGAGCAGGC ACTGGCCCAG GTGGAGCGGC TGGTGAACCA GCAGGCCTTC
ATGCTCGCGG CCAACGACAT CTTCTATGCC TCGGCCCTGC TGTTCCTGCT GCTGATCCCG
CTGGTGTGGC TGGCCCACCC CACGCGCGCT GCCAGCGGCA GCGCCGACGC CGCGGCCGGT
GCGCATTGA
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| Protein sequence | MTAPAHTPPL PPPPLTGSAR LWGTLALSAA TFMNVLDTSI ANVSLPAIAG DLGVSPTQGT
WVITSFAVAN AIAVLLTGWL SQRFGQVRLF VASVALFVIA SLLCGLAPNM TLLIAARALQ
GFVAGPMIPL SQSLLLSSYP RALAGLAMAM WSMTTLIAPV MGPLLGGWIT DNMTWPWIFY
INVPVGIAAV VVTWGIFHQR ETERRALPID SIGLALLVIW VGAMQVMLDI GKEHDWFESP
WVVACGLVAL VGLVAFVVWE RGEDHPVVDL ALFRIRNFWA GALATSVGYG LFFGNVVLLP
LWLQQYMGYT ATQAGEVMAP VGLLAMVLSP LVGKNIAKVD PRRFATLAFL VFALVLWMRS
NFNTQADLAT IMVPTIIQGV AMAFFFIPLV TITLSGIAPD RIPAASGLSN FMRITAGAVG
TSVTTTLWER RASLHHAQLT EGLHQGHLPF TQALQGLQAG GLTPEQALAQ VERLVNQQAF
MLAANDIFYA SALLFLLLIP LVWLAHPTRA ASGSADAAAG AH
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