Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0237 |
Symbol | gatA |
ID | 4672151 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 252546 |
End bp | 254048 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639837368 |
Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
Protein accession | YP_984567 |
Protein GI | 121592671 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.780008 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAACA CCCCCTCCTC CGAACTCCAC GACCTGGGCA TCGCACAGCT GACCAGCGCA CTGCGCAGCA AACAGGTCTC GGCCGTCGAG GCCGCGCAGC ATTTCCTGGC CCGCGCACGC CAGCACCAGA ACCTGGGCGC CTACGTCGCC ATGAACGAGG ACGCCACCCT GGCGCAGGCC CGCGCGCAGG ACGCGGCCCT CGCCGCCGGC ACGGCTGCCC CGCTGGCCGG CGTGCCGATC GCGCACAAGG ACATCTTCGT CACCCGCGAC TTCCCCAGCA CCGCCGGCTC GAAGATGCTG GCCGGCTACC ATTCGCCTTT CGACGCGACC GTGGTCACCC GGCTGGCAGA TGCCGGCTGC GTGACCCTGG GCAAGCTCAA CTGCGACGAG TTCGCCATGG GCTCGGCCAA CGAGAACTCG GCCGTGGCGC CCGTGGGCTG CGACGCCCCC GCACCGGTGC GCAACCCCTG GGACACCAGC CGCATCCCCG GCGGCTCCTC GGGCGGCAGC GCCGTGGCCG TGTCCGCGCG CCTGGCGCCG GCCGTCACGG GCACGGACAC GGGCGGCTCC ATCCGCCAGC CGGCATCGTT TTGCGGCGTC ACCGGCATCA AGCCCACCTA CGGCCGCGCC AGCCGCTACG GCATGATCGC CTTCGCCTCC AGCCTGGACC AGGCCGGCCC GATGGCCCGC TCGGCCGAGG ACTGCGCGCT GCTGCTGTCG GCCATGTGCG GCCCCGACCC CGACCGCGAC TCCACCAGCC TGGACGTGCC GGCCGAGGAT TTCAGCGCCC AGCTGAATGA CTCCATCGAC GGCCTGCGCA TCGGCATCCC GGCCGAGTTC TTCGGCGACG GCCTGGCGGG CGACGTGCGT GCCGCCGTCG ATGCGGCACT CAAGGAGTAC GAGAAGCTGG GCGCAAAGCT GGTGCCCATC AGCCTGCCGC GCACGGAGCT GTCGATCCCC GTGTACTACA TCATTGCGCC GGCCGAGGCG TCGTCCAACC TCTCGCGCTT TGACGGCGTG AAGTTCGGCC ACCGCGCCAA GGACTACGCC GATCTGGTGG ACATGTACAA GAAGACCCGC GCCGAAGGCT TCGGCGACGA GGTCAAGCGC CGCATCATGA TCGGCACCTA CGTGCTCTCG CACGGCTACT ACGATGCCTA CTACCTGCAG GCGCAGAAGA TCCGCCGCAT GATCGCGGAC GACTTCCAGA ACGCCTTCAA GGATTGCGAC CTGATCGCCG GCCCCGTGGC GCCCAGCGTG GCCTGGAAGC TCGGCGAGCA CGGCAACGAC CCGCTGGCCG ACTACCTGGC CGACATCTTC ACCCTGCCCG CATCGCTGGC CGGCCTGCCC GGCATGAGCG TGCCCGCCGG CTTTGGCGCG GGCGGCATGC CCGTGGGCCT GCAGCTCATC GGCAACTACT TCCAGGAGGG CCGCCTGCTG AACGCCGCGC ACCGCCTGCA GCAGGCGACC GACTTCCACC TCCGTGCGCC GGAGGGCATC TGA
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Protein sequence | MSNTPSSELH DLGIAQLTSA LRSKQVSAVE AAQHFLARAR QHQNLGAYVA MNEDATLAQA RAQDAALAAG TAAPLAGVPI AHKDIFVTRD FPSTAGSKML AGYHSPFDAT VVTRLADAGC VTLGKLNCDE FAMGSANENS AVAPVGCDAP APVRNPWDTS RIPGGSSGGS AVAVSARLAP AVTGTDTGGS IRQPASFCGV TGIKPTYGRA SRYGMIAFAS SLDQAGPMAR SAEDCALLLS AMCGPDPDRD STSLDVPAED FSAQLNDSID GLRIGIPAEF FGDGLAGDVR AAVDAALKEY EKLGAKLVPI SLPRTELSIP VYYIIAPAEA SSNLSRFDGV KFGHRAKDYA DLVDMYKKTR AEGFGDEVKR RIMIGTYVLS HGYYDAYYLQ AQKIRRMIAD DFQNAFKDCD LIAGPVAPSV AWKLGEHGND PLADYLADIF TLPASLAGLP GMSVPAGFGA GGMPVGLQLI GNYFQEGRLL NAAHRLQQAT DFHLRAPEGI
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