Gene Ajs_0237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0237 
SymbolgatA 
ID4672151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp252546 
End bp254048 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content70% 
IMG OID639837368 
Productaspartyl/glutamyl-tRNA amidotransferase subunit A 
Protein accessionYP_984567 
Protein GI121592671 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID[TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.780008 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACA CCCCCTCCTC CGAACTCCAC GACCTGGGCA TCGCACAGCT GACCAGCGCA 
CTGCGCAGCA AACAGGTCTC GGCCGTCGAG GCCGCGCAGC ATTTCCTGGC CCGCGCACGC
CAGCACCAGA ACCTGGGCGC CTACGTCGCC ATGAACGAGG ACGCCACCCT GGCGCAGGCC
CGCGCGCAGG ACGCGGCCCT CGCCGCCGGC ACGGCTGCCC CGCTGGCCGG CGTGCCGATC
GCGCACAAGG ACATCTTCGT CACCCGCGAC TTCCCCAGCA CCGCCGGCTC GAAGATGCTG
GCCGGCTACC ATTCGCCTTT CGACGCGACC GTGGTCACCC GGCTGGCAGA TGCCGGCTGC
GTGACCCTGG GCAAGCTCAA CTGCGACGAG TTCGCCATGG GCTCGGCCAA CGAGAACTCG
GCCGTGGCGC CCGTGGGCTG CGACGCCCCC GCACCGGTGC GCAACCCCTG GGACACCAGC
CGCATCCCCG GCGGCTCCTC GGGCGGCAGC GCCGTGGCCG TGTCCGCGCG CCTGGCGCCG
GCCGTCACGG GCACGGACAC GGGCGGCTCC ATCCGCCAGC CGGCATCGTT TTGCGGCGTC
ACCGGCATCA AGCCCACCTA CGGCCGCGCC AGCCGCTACG GCATGATCGC CTTCGCCTCC
AGCCTGGACC AGGCCGGCCC GATGGCCCGC TCGGCCGAGG ACTGCGCGCT GCTGCTGTCG
GCCATGTGCG GCCCCGACCC CGACCGCGAC TCCACCAGCC TGGACGTGCC GGCCGAGGAT
TTCAGCGCCC AGCTGAATGA CTCCATCGAC GGCCTGCGCA TCGGCATCCC GGCCGAGTTC
TTCGGCGACG GCCTGGCGGG CGACGTGCGT GCCGCCGTCG ATGCGGCACT CAAGGAGTAC
GAGAAGCTGG GCGCAAAGCT GGTGCCCATC AGCCTGCCGC GCACGGAGCT GTCGATCCCC
GTGTACTACA TCATTGCGCC GGCCGAGGCG TCGTCCAACC TCTCGCGCTT TGACGGCGTG
AAGTTCGGCC ACCGCGCCAA GGACTACGCC GATCTGGTGG ACATGTACAA GAAGACCCGC
GCCGAAGGCT TCGGCGACGA GGTCAAGCGC CGCATCATGA TCGGCACCTA CGTGCTCTCG
CACGGCTACT ACGATGCCTA CTACCTGCAG GCGCAGAAGA TCCGCCGCAT GATCGCGGAC
GACTTCCAGA ACGCCTTCAA GGATTGCGAC CTGATCGCCG GCCCCGTGGC GCCCAGCGTG
GCCTGGAAGC TCGGCGAGCA CGGCAACGAC CCGCTGGCCG ACTACCTGGC CGACATCTTC
ACCCTGCCCG CATCGCTGGC CGGCCTGCCC GGCATGAGCG TGCCCGCCGG CTTTGGCGCG
GGCGGCATGC CCGTGGGCCT GCAGCTCATC GGCAACTACT TCCAGGAGGG CCGCCTGCTG
AACGCCGCGC ACCGCCTGCA GCAGGCGACC GACTTCCACC TCCGTGCGCC GGAGGGCATC
TGA
 
Protein sequence
MSNTPSSELH DLGIAQLTSA LRSKQVSAVE AAQHFLARAR QHQNLGAYVA MNEDATLAQA 
RAQDAALAAG TAAPLAGVPI AHKDIFVTRD FPSTAGSKML AGYHSPFDAT VVTRLADAGC
VTLGKLNCDE FAMGSANENS AVAPVGCDAP APVRNPWDTS RIPGGSSGGS AVAVSARLAP
AVTGTDTGGS IRQPASFCGV TGIKPTYGRA SRYGMIAFAS SLDQAGPMAR SAEDCALLLS
AMCGPDPDRD STSLDVPAED FSAQLNDSID GLRIGIPAEF FGDGLAGDVR AAVDAALKEY
EKLGAKLVPI SLPRTELSIP VYYIIAPAEA SSNLSRFDGV KFGHRAKDYA DLVDMYKKTR
AEGFGDEVKR RIMIGTYVLS HGYYDAYYLQ AQKIRRMIAD DFQNAFKDCD LIAGPVAPSV
AWKLGEHGND PLADYLADIF TLPASLAGLP GMSVPAGFGA GGMPVGLQLI GNYFQEGRLL
NAAHRLQQAT DFHLRAPEGI