Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0159 |
Symbol | |
ID | 4670633 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 178123 |
End bp | 178932 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639837291 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_984490 |
Protein GI | 121592594 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCACG CCGCATCTTC TTCCTCCTCT ACGGCCACCG CCGGCATGGC CGCCCGCCCG GCCATCGCCC TCATCACCGG CGGCAGCCGG GGACTGGGCC GCAATGCCGC GTTGCACGTG GCGCGGTCCG GCACCGATGT GATCCTGACC TACCGCAGCC AGGCCGCCGA GGCGCAGGCC GTCGTCGCAG AGATCGAGGC CCTCGGCCGC CGCGCCGTGG CGCTGCCCCT GGACGTGGCG GCCAGCGCCA CCTTCACCGC TTTCGCAGGC CAGGTGCGCG ACGTGCTGGC GCGGCACTGG CAGCGCGAGC GCTTCGACTT CCTCGTGAAC AACGCGGGCG TGGGCGGGTA TGCCAGCTTC ATGGAAACCA CCGAGGCGCA GTTCGACGAC ATGGTCAACA TCCACCTCAA GGGCGTGTTT TTCCTCACAC AGAAGCTGCT GCCGCTGATG AACGACGGCG GGCGCATCCT GAACGTGTCG TCGGGCCTGG CGCGGTTCGC GCTACCGGGC TACGCGGCCT ATGCGGCGAT GAAGGGCGGG GTGGAGGTGC TGACGCGCTA CCTGGCCAAG GAACTGGGCG CCCGCGGCAT TGCCGTGAAC GTGGTGGCGC CTGGTGCGAT CGAGACGGAT TTTGGCGGCG GCGCCGTGCG CGACAACGCG CAGCTCAACG CCTTCATCGC CGGCCAGACC GCGCTGGGGC GCGTGGGCCT GCCGGACGAC ATCGGTGGCG TGATCGCTGC GCTGCTGCAG CCGGGCACGG GCTGGGTGAA CGCACAGCGC ATCGAGGCAT CGGGCGGCAT GTTCGTTTGA
|
Protein sequence | MTHAASSSSS TATAGMAARP AIALITGGSR GLGRNAALHV ARSGTDVILT YRSQAAEAQA VVAEIEALGR RAVALPLDVA ASATFTAFAG QVRDVLARHW QRERFDFLVN NAGVGGYASF METTEAQFDD MVNIHLKGVF FLTQKLLPLM NDGGRILNVS SGLARFALPG YAAYAAMKGG VEVLTRYLAK ELGARGIAVN VVAPGAIETD FGGGAVRDNA QLNAFIAGQT ALGRVGLPDD IGGVIAALLQ PGTGWVNAQR IEASGGMFV
|
| |