Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0142 |
Symbol | |
ID | 4674315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 157479 |
End bp | 158402 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639837274 |
Product | intradiol ring-cleavage dioxygenase |
Protein accession | YP_984473 |
Protein GI | 121592577 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
TIGRFAM ID | [TIGR02439] catechol 1,2-dioxygenase, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.38162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGAAT ACACCGCCCA GCAGTTGCTG GACATCGTCA ACACCGTGCA CGTGGCCGAG GGCAATGCCC GCGTGCGCCA GATCACGCAG CGCATCGTCA CGGATCTGTT TCGCACCATC GAAGACCTGG AGGTGACGCC CGACGAGTTC TGGGCCGGCG TCAGCTGGCT CACGCGCCTG GGCGCCAGCG GCCAGACGGG CCTGATCACC GCCGGCCTGG GCTTTGACCG CCTGATCGAC ATCCGCATGG ACGAGGCCGA CGAGCGCGCC CAGCGCGCCG CCGGCACACC GCGCGCCATC GAGGGCCCGC TGTTCGTGGC CGGCGCGCCG CTGTCCGAGC GCGAGGTGCG CCTGGACGAG GGCGAGGAGC CGCCGCGCGG CGAGGTGGTG GTGATGGAAG GCCGCGTGCT CGATACCGAC GGCCAGCCCG TGGCCGGCGC GCTGGTGGAC GTGTGGCACG CCAACGAGCT GGGCCGCTAC TCGCACTTCG ACCCCGGCCA GGCGCCCTAC CACCTGCGCC GCAAGATTCG CACTGGCGCG GACGGCAGCT ATCGCTTTCG CAGCTTCATC CCGCCGGGCT ATGCCATCCC GCCGGGCAGC CCCACGGCCG AACTGTTCAA TGCCCTGGGC CGCCATGGCA ACCGCCCCGC GCACATCCAC TTCCTGGTGG TGGCAGACGG CCTGCGCACG CTGACCACGC AGGTCAACAT TCCGGGCGAC AGCTTCCTGG ACGACGACTT CGCCTTCGCC ACGCGCGACG GCCTGGTGGT CACGCTGGAG CCGGGCACGC CCGCCGCCGG CTATGAATCG CTGGGCATCA GCGCGCCGTT CACCCGCGTG CGCTTTGACT TCGTGCTGCA AAAGGCCCTG TCGGCCGACG AGCAGCGCCC CGAGGCACGC ATGGACCGCG TGGCCGCCGC CTGA
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Protein sequence | MAEYTAQQLL DIVNTVHVAE GNARVRQITQ RIVTDLFRTI EDLEVTPDEF WAGVSWLTRL GASGQTGLIT AGLGFDRLID IRMDEADERA QRAAGTPRAI EGPLFVAGAP LSEREVRLDE GEEPPRGEVV VMEGRVLDTD GQPVAGALVD VWHANELGRY SHFDPGQAPY HLRRKIRTGA DGSYRFRSFI PPGYAIPPGS PTAELFNALG RHGNRPAHIH FLVVADGLRT LTTQVNIPGD SFLDDDFAFA TRDGLVVTLE PGTPAAGYES LGISAPFTRV RFDFVLQKAL SADEQRPEAR MDRVAAA
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