Gene Ajs_0100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0100 
Symbol 
ID4672093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp112249 
End bp112716 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content71% 
IMG OID639837232 
Producthypothetical protein 
Protein accessionYP_984431 
Protein GI121592535 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID[TIGR00369] uncharacterized domain 1 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.420751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.431878 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAAC CGTCTTCCAT CACCGCCAAC ATCCCCCTGA GCCCCTTCGC CGGCGAAGCC 
CCCGACATGT TCTTTGGCCT GCCCATGGCC ATGGCCCGCG CCATGGCGCT GCGCGGTGAG
CGCATCGGCC ACGACATGGC CCAGGTGCGC ATGCGTTTCC AGGCGGACCA GGCCAACAGC
CGCGGCGAGG TCCACGGCGG ATCGATCGCT ACGCTGCTGG ACTGCACGCT GGCCTCGGCC
GCGCGCGCGC ACGACCCGGC TGCCTATGGC GTGGCCACCA TCGACCTGAC GCTGCATTAC
GTCGCCGCGG GCAGGGGCGA TCTGATTGCC ACCGCGCGCT GCGAGCGGCG CGGCCGCTCC
ATCAGCTTCG TGCGCGGCGA AGTGCGCGCC GAGGACGGCA CGCTGGTGGC CATGGCGACG
GGCAGCTTCA AGCTGATCGC CCGCTCCACT GCATCCGCCA GCGCCTAG
 
Protein sequence
MQQPSSITAN IPLSPFAGEA PDMFFGLPMA MARAMALRGE RIGHDMAQVR MRFQADQANS 
RGEVHGGSIA TLLDCTLASA ARAHDPAAYG VATIDLTLHY VAAGRGDLIA TARCERRGRS
ISFVRGEVRA EDGTLVAMAT GSFKLIARST ASASA