| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0096 |
|---|
| Symbol | |
|---|
| ID | 4672014 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidovorax sp. JS42 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008782 |
|---|
| Strand | + |
|---|
| Start bp | 107110 |
|---|
| End bp | 108318 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639837228 |
|---|
| Product | aspartate aminotransferase |
|---|
| Protein accession | YP_984427 |
|---|
| Protein GI | 121592531 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACAACC CCGCTTCGCC CACCGATACC CTCCTGCCCG CCCTGGCGCG GCCCGCCATC
CAGAGCCTGG GCGGATCGCT GATCCGCGAA GTCGCCAACA CCGACATGGG GCGCGCGGAC
GTGCTGCCCT TCTGGTTTGG CGAGTCCGAC CAGCCCACGC CGCAGTTCAT CCGGGATGCG
GCGGCGCAGT CGCTCGGCTC GGGCGAGACC TTCTATTCGC AGAATCTGGG CCGGCCCTAC
CTGCGCGAGG CCATCGCGCA ATATCTGTCG GACCTGCACG GACGCGAGGT GTCCCCCCAG
CGCATCGGCG CTGTGGCCTC GGGCGATGCC GGGCTGATGC TTACCTGCCA GATGCTGCTG
TCACCGGGCG ATCGCGTGGT GGCCGTCACG CCGCTGTGGC CCAACCTGCT GGAGATGCCG
CGCATCCTGG GCGCGCAGGT TGAACGCGTG CCACTGGCGG TGCGGGGCGG GCGCTGGACG
CTTGCGCTGG ATCGGCTGCT GGATGCGCTC ACGCCGGGCA CGCGCATGCT CATCCTCAAT
TCACCCAACA ACCCCACAGG CTGGACCATC GATGAGGAAA GCCTGGTGGC GATCCTCGCG
CACTGCCGCC GCCATGGCAT TTGGATTCTG AGCGACGACG TGTACGAGCG TCTGGTATAC
GACCCGCAGC TGGCCAGCGC ACCTTCTTTC CTGCGCCACT ACGCACCGGG CGACCGCATC
ATCTCGGTCA ACAGTTGTTC CAAGGCGTGG TGCATGACGG GTTGGCGCGC GGGTTGGATG
GTGGTGCCCG AGGCGCTGGA GGCCGACCTG GGCAAGGTCA TCGAATACAA CTTCTCCTGC
ATCTTCGAGC CCGTGCAGCG CGCCGCAACG GTGGCTTTGC AGCAGGGCGA GGCGCATGTG
GCGCAGCTGC GCGCGGGCCT CGTGGAAAGC CGCCGGCTGC TGGTGCAAGC GCTGCGTGCC
GTGCCGGGTG TGGAAGTGCC CGATGCCGGC GGGGCGATGT ACGTGTTCTT CCGCCTGGCG
GGCTTTGACG ACTCCCTGGC GCTTGCCAAA CATCTGGTGA GCGAGGTCGG CTTGGGCCTG
GCGCCGGGCG CGGCCTTCGG CCCCGAGGGT GAAGGCTGGC TGCGCTGGTG CCACGCGGTG
TCCGATGGGG CCAGACTGCG TGAGGGCGTG GAGCGTCTTG CGCGATTCGT GCAGCGTGCC
ACGGCTTGA
|
|---|
| Protein sequence | MHNPASPTDT LLPALARPAI QSLGGSLIRE VANTDMGRAD VLPFWFGESD QPTPQFIRDA
AAQSLGSGET FYSQNLGRPY LREAIAQYLS DLHGREVSPQ RIGAVASGDA GLMLTCQMLL
SPGDRVVAVT PLWPNLLEMP RILGAQVERV PLAVRGGRWT LALDRLLDAL TPGTRMLILN
SPNNPTGWTI DEESLVAILA HCRRHGIWIL SDDVYERLVY DPQLASAPSF LRHYAPGDRI
ISVNSCSKAW CMTGWRAGWM VVPEALEADL GKVIEYNFSC IFEPVQRAAT VALQQGEAHV
AQLRAGLVES RRLLVQALRA VPGVEVPDAG GAMYVFFRLA GFDDSLALAK HLVSEVGLGL
APGAAFGPEG EGWLRWCHAV SDGARLREGV ERLARFVQRA TA
|
|---|
| |