Gene Ajs_0070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0070 
Symbol 
ID4672480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp73689 
End bp74879 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content69% 
IMG OID639837202 
Productextracellular ligand-binding receptor 
Protein accessionYP_984401 
Protein GI121592505 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCCA TGAGACCCAG ACACTGGGCA GGGGCGCTGG CGCTGTGGGC GTTGGCGGGC 
ATGGCGGGCG CCCAGCCCGT GAAGGTGGGG GTCATCGGCC CCTTTTCGGG GCCGTCGTCG
GACTTCGGCA CGCCCATGCT GCAGGGCATC CAGCTCGCGG TGGAGCAGTT CAACGCCGTG
GGCGGCTACC TGGGCCGGCC TGTGGAGCTG GTGGTCAAGG ACGACCAGGG CTCGCCCGAC
ACCGGCCGTC AACGCTCGCA GGAACTGGCC AGAGAAGGCG TGGTGGCTGC CCTGGGCTTT
TGCAACACCG GCGTGGCGAT GAAATCGCTG GACGTGTTCC AGCAGGCGAA GCTGCCCTTG
ATCGTGCCGT GCGCCACGGG CACCCCTGTG ACACGCACCT ATCCGGCGGC GCAGAGTTTT
ATCTTCCGCA CCTCGGCCCC CGACAACATC CAGGCGCCCT TCGTGGTGGA GGACATCCTG
CGCCGCGGCT GGACGCGCGT GGCCCTCTTT GCCGACGACA CGGGCTACGG CCAGGCCGGG
CGCAAGGATG TGGAAGCGGC GCTCGCCGCG CACCAGCTCA CGCCCGTGTA CGCGACCAAC
TTCCCTCTGG GCGTGAAGAG CCTGGCGCCC CAGTTGCAGG CCGCGCGCGA TGCGGGCGCA
CAGGTCATCT TCAGCTACAC CGTGGGGCCG GAGAACGCCG TCATTGCCCA AGGCCGCAAG
GAGCTGGGCT GGAAGGTGCC GCAGGTCGGC GGCTGGACGC TGTCGTTCCC GTTCTTCATC
CAGGGCGGCA AGGACGCCGC CGAGGGGGCG CTGACGGCGC AGACTTTCAT CGCCGAGCCC
AGCAACGAAC GCCGCGCCTC GTTCCTGAGC ACCTACGCGC GTGCCTTCAA AGGCCGCCCG
GCCGTGCCGA TGGCGGCGGC GCAAGGGTAC GACGCGGCCT ACCTGCTGAT GTATGCCCTG
CTGGGCATCC GCGACGGGCA GGTCAACGGC ACGGCCCTCA AGCATTCGCT GGAGAACCTG
CAGCGCGTGT ATTACGGCGT GGTGGCGACC TACGAGCGGC CCTTCTCGGC CGAGGAGAAA
GAAGCCATCA CCCCCAACAT GCTGGTGATG GGCAAGGTGC AGGCCGGCGC GGTGACCTTC
GCCTACCCCG AGGATGCCAA GCGCAACCTG CTGGTGCAGC GCAAACGCTG A
 
Protein sequence
MMAMRPRHWA GALALWALAG MAGAQPVKVG VIGPFSGPSS DFGTPMLQGI QLAVEQFNAV 
GGYLGRPVEL VVKDDQGSPD TGRQRSQELA REGVVAALGF CNTGVAMKSL DVFQQAKLPL
IVPCATGTPV TRTYPAAQSF IFRTSAPDNI QAPFVVEDIL RRGWTRVALF ADDTGYGQAG
RKDVEAALAA HQLTPVYATN FPLGVKSLAP QLQAARDAGA QVIFSYTVGP ENAVIAQGRK
ELGWKVPQVG GWTLSFPFFI QGGKDAAEGA LTAQTFIAEP SNERRASFLS TYARAFKGRP
AVPMAAAQGY DAAYLLMYAL LGIRDGQVNG TALKHSLENL QRVYYGVVAT YERPFSAEEK
EAITPNMLVM GKVQAGAVTF AYPEDAKRNL LVQRKR