Gene Ajs_0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0060 
Symbol 
ID4671833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp65113 
End bp66081 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content68% 
IMG OID639837192 
Producthypothetical protein 
Protein accessionYP_984391 
Protein GI121592495 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCTC GCATCACCCG CCGCCTGGCC GTACTGGCCG GCGCAGCCCT TCTGGCCGGC 
GCCGCGCACG CCGCCTGGCC GGACAAGCCC ATCACGCTCG TCGTGCCGTT CCCGCCCGGC
GGTCCCACCG ACATGGTGGC GCGCGTGCTG GCGCAGGCCG TGGGCGAGCA GCTCGGTCAG
TCGGTCGTGG TGGACAACAA GCCCGGCGCC AATGGCAACA TCGGCAACGC CTTCGTCGCC
AAGGCCGCGC CCGACGGCTA CACGGTGCTC TACAACACCT CGTCCCTCGC GCTCAGCCCC
GCGCTCTACA AGAAGATGAG CTACGACCCG CGCAAGGACC TCGCGCCTGT CGCGCTCACC
GCAGTGGTGC CCCTGGGCCT GGTGGTCAAC CCGCAGCTGC CTGTGAAGAC TGTGGCCGAG
CTCGTGGACT ATGCCAAGAA GAACCCCGGC AAGCTGTCGT ACGGCTCGGC GGGCAATGGC
AACGTCACGC ACCTCACGGC CTTCCAGGTC ACGCAGCACT ACGGCATCGC GGCCACGCAC
GTGCCCTACA AGGGCAGCGC ACCGGCCGAC GTCGACCTGG TGGCCGGGCA AATCCATTTC
ATGACGGACA CGATCAACTC CGTCGCCCCC TTCATCAAGG ACGGCAAGCT GCGCCTGCTG
GCCGTCTCCA CGGCCAAGCG CCTGCCCAAC TTCCCTGAAG CACCCACGCT GGCCGAAAGC
GGCATGAACG GCTTCGAGGC CGGCGCGTGG CAGGGCGTGA TGGTGCCGGC CGGCACGCCC
GCGCCCATCA TCGAGCGCTT GAACCAGGCC TTTCTGCAGG CGCTCAAGAA CCCCACGGTG
CTGGAAAAGC TGCGCATCCA GGGCACCGAG CCGCTGGGAT CCACGCCGGC CGAGTACGGC
GCATATATCG AAAAGGAGCT GGCGCGCTGG GCGTCAGTGG TCAAGAGCAC CGGCGTATCG
CTGGATTAA
 
Protein sequence
MTARITRRLA VLAGAALLAG AAHAAWPDKP ITLVVPFPPG GPTDMVARVL AQAVGEQLGQ 
SVVVDNKPGA NGNIGNAFVA KAAPDGYTVL YNTSSLALSP ALYKKMSYDP RKDLAPVALT
AVVPLGLVVN PQLPVKTVAE LVDYAKKNPG KLSYGSAGNG NVTHLTAFQV TQHYGIAATH
VPYKGSAPAD VDLVAGQIHF MTDTINSVAP FIKDGKLRLL AVSTAKRLPN FPEAPTLAES
GMNGFEAGAW QGVMVPAGTP APIIERLNQA FLQALKNPTV LEKLRIQGTE PLGSTPAEYG
AYIEKELARW ASVVKSTGVS LD