| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_2004 |
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| Symbol | |
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| ID | 8324104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 2120900 |
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| End bp | 2121637 |
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| Gene Length | 738 bp |
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| Protein Length | 245 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644953129 |
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| Product | regulatory protein GntR HTH |
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| Protein accession | YP_003110579 |
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| Protein GI | 256372755 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00794918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCTCGAG CCGCCGAGCA CGTGCTCACG CACGTGCCGT TCTCATCGCT GCACGAGACC
GACAAGGTCG ACCAGGTGGT CCAGCGGCTC GACCACGCCA TCGCGGCCGG ACTCCTTCCG
ACGGGCTCAC GCCTGCCACC CGAAGCGCTC CTTGCCCGCA TGCTCGGCAT CTCGCTCACC
ACGCTGCGGG CTGCGCTCGG CATCCTCCGG CTCCGCGGCA CGATCACGAC GCGCCGAGGC
CGCCAAGGCG GATCGGTCGT CACCGCCGAC CCAGAGGCCG TGCGCGCCGC CGCGATCGCA
CGGCTTCGCA CACTCGGTCC CTCCGAGGTT CGCGACGAGG GCGACCTCCA TGCAGCGATC
CTCACGAGGA GCGCAACCCT CGCGGCCGAG CGCGCCACCG ACGGCGAACG CTTGGCGCTC
TCGCTGGCTG CGACCATGCT CGACGAACTC TCTCTGATGC ATGAGCTCCA ACTCCATCTC
GAACTGGTTG CACTGGCACA GTCGACGAAG CTCCTCGAGG TCGAACTCGA CTGTCTCCTC
TGGTTCGGAG GCTTCCTTCA GCTCCGCTCC GACACCGAGA GGAGCGCCAT GCTGGCGTCA
CTCGGCAGCC TCGTGGCGGC GGTCGCCGAG GGAACCAGCG AGGAAGCCGG TCGACGCGCG
CAGCGACACG CAGAGCGCAT GACGCGATGG GTGCATGCCA CCCTCATCGC CACGACGCAT
GAGGACGGCC AGCGATGA
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| Protein sequence | MPRAAEHVLT HVPFSSLHET DKVDQVVQRL DHAIAAGLLP TGSRLPPEAL LARMLGISLT
TLRAALGILR LRGTITTRRG RQGGSVVTAD PEAVRAAAIA RLRTLGPSEV RDEGDLHAAI
LTRSATLAAE RATDGERLAL SLAATMLDEL SLMHELQLHL ELVALAQSTK LLEVELDCLL
WFGGFLQLRS DTERSAMLAS LGSLVAAVAE GTSEEAGRRA QRHAERMTRW VHATLIATTH
EDGQR
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