| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1988 |
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| Symbol | |
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| ID | 8324088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 2097644 |
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| End bp | 2102137 |
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| Gene Length | 4494 bp |
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| Protein Length | 1497 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644953114 |
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| Product | Glutamate synthase (ferredoxin) |
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| Protein accession | YP_003110564 |
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| Protein GI | 256372740 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0069] Glutamate synthase domain 2 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGACC GGCTAGGCCG CTCGCTACCG CCGCTGTATC GACCCGATGC CGAGCACGAC
GCCTGCGGTA TCGCAGCCCT CGCTCGGCTC GACGGCGTCC GATCGCATGC GCTCGTCGAG
CAAGCCCTCG GCGCGCTCGT CAACCTCGAG CACCGCGGGG CGAAGGGCGC CGAGCCCGAC
ACCGGCGACG GCGCCGGCAT CTTGACCCAG AACCCGGATG CCTACTGGCG ATCCCTCGGG
ATCGACCTAC CCGACGAGGG TGCCTACGTG ACGGGCATCG CGTTCGCCGA GCGCAGCGTC
GAGGAGCTGC GTGACGCGCT CGCGAGCGGG CTCGGTCCGG AGCTCCGCCT CATCGCCGAG
CGTGCGGTGC CGCGTGACTC GAGCGTGCTG GGAGCGACCG CGCGGCGCAG CGAGCCCACC
ATGGTCCAGG TGTTCCTCGC GTCGACGCAG GGACGGCGCG ACGAGGCGCT CGAGATCGAT
GCGTGGTTGG CTCGCCGACG GCTCGAGCAT GCCCATCCGT GGCTGTACTT CCCATCGCTG
TCGGGCCGGA CCATGGTCTG GAAGGGGATG CTCTCGGCGC CGCAGGTGGC CGCCTACTAC
CGCGACCTCG AGGCCGAGGA GCTCACCAGC GCGCTCGCGC TCGTGCACTC GCGATTCTCG
ACGAACACCA TGCCGTCGTG GCGTCTCGCG CATCCCTTCC GGATGGTGGC CCACAACGGT
GAGATCAATA CGATCCGTGG CAACCGCGCC TGGATGCGAG CTCGCGAGTC GCTGCTCGCT
CACCCGGAAC TCGGTCCTCG GCTCGCCGAG GCGCTGCCGA TCACGCGCAC GGACGAGAGT
GATTCGGCCT CCTTCGACGC GGTCTTCGAA CTCCTCGTGC GGGGCGGGAG GAGCCTCGCG
CACGCCATCT TGATGATGAT CCCCGAGGCG TGGGAGCACA ACGAGGAGAT GGAGCCGCGC
GTGCGCGACT TCTACCGCTT CCATTCCTCG CTCATGGAGC CGTGGGACGG CCCTGCTGCC
GTGGTTTTCA CGAACGGTCG TGAGGTCGGC GCGGTGCTCG ACCGCAACGG TTTGCGCCCG
GCCAGGTGGT GGCGCACCGA CGACGGCCTG GTGGTGCTCG GCTCCGAGGC GGGGATCGTC
GACGTGGCGC CCGACCATAT CGTCGCGAAG GGTCGACTCG AGCCCGGTCG CGTGTTCCTC
GTCGACACCG AGCGCGGCGA GGTGCTCGAC GACCTTGCCG TGAAGCGCGA ACTGGCCGGC
GCGGCCCCGT GGGGAGCCTG GCTCGCCGCG AACCTCGTCA CGTTGGACGA CCTCGCGCCA
CGTACCATGC TCATCCCACA GCACGGATCG ATCGTGACGC GCCAGCAGCT CTTCGGCTAC
ACCGAGGAAG AGGTGCGTCG CATCGTCACC CCCATGGCTG AGCGCGGGGA GGAGCCCATC
GGATCCATGG GGGCCGACAT CCCGCCGGCG GTGCGCTCGG AGGCCCATCG GCCACTGTGG
GACTTCTTCG TCGAGCAGTT CGCACAGGTG ACGAACCCTC CCCTCGACGC GATCCGTGAG
GAGCTCGTCA CGAGCGCCGC AGGCACCATC GGCCCCGAGC AGAACCTGCT CGTGCCCGAG
CCGACGGCGG CGCGACAGAT CTTTCTCCCG CACCCGGTCC TCGACAACGA CGAACTCGCC
AAGCTGCTCT ACATCGACGA GGACGGTGAG CACGCCGACC TTCGGGCGCA CGCCATCGAC
ATGCTCTACC CGGTGGCGGA GGGGCCGAGT GGGCTCGAGG CGGCGATCGG CCGGATCCGG
GACGAAGCGG TGCAGGCCAT CGAGCGCGGA GCCGCGGTCA TCGTGCTCTC CGATCGGCAC
GCGAGTGCGG AGCTCGCGCC GATCCCGTCC CTGCTCGCGA CCTCGGCGGT CCACCACCAC
CTCGTGCGGC ACCGCTTGCG GACCCGTGCG GGGCTCGTCG TCGAGTGCGG TGACGCGCGC
GAGGTGCACC ACTTCGCCGC CCTCATCGGT TTCGGCGCGG CGGCGGTCAA TCCCTACCTC
GTGTTCGACA CCATCGTCGA CCGCATGCGG GCCGGTCTCA TCGTCGGACC GACGCCCCGC
CAGGCGATGC GCAACTACGT CAAGGCCGCG ACGAAGGGCG TCGTGAAGGT GATGTCGAAG
ATGGGCATCT CCACCATCGC CTCCTACACC GGCGCACAGG TCTTCGAGGC GATCGGACTG
GCGCGAGACC TCGTCGACGA GTACTTCCCC GGGACACCGG CGCCGATCGA GGGCATCGGC
CTCCGAGAGA TCCACGAGAC GGTCGCCTAC CACCATCGGC GTGCCTTCGA GGTGCGACCC
GAGGCAGAGG CCCATCGCGA GCTCGAGGTC GGCGGCCTCT ACCAGTGGCG TCGTGAGGGG
GAATACCACC TGTTCAACCC CGAGACGGTG TTCTTGCTGC AGCACGCCAC GCGTGAGGGG
CGCATCGAGG TGTTCCGTCG CTACGAGCAG CTCGTCGACG AGGGTGCTCG GCGGTTCGCG
ACGCTGCGGG GCCTGCTCGC GATCCGCGAG GCGGCCGATC CCCTCCCGAT CGAGGAGGTC
GAGCCCGCCG AGGCCATCGT CACGCGCTTT GCTACCGGTG CGATGTCGTA TGGCTCGATC
TCGAAGGAGG CGCACGAGAC CCTCGCGATC GCGATGAACC GGATCGGAGC GCGCTCGAAC
TCGGGCGAGG GTGGCGAGGA CGCCGAACGT GCGTTCCCTG ACGCGGATGG TCTCGATCGT
CGATCGCGGA TCAAGCAGGT CGCCTCCGGC CGCTTCGGCG TGACGAGTTT CTACCTCGCA
TCGGCGGACG ATCTCCAGAT CAAGATCGCC CAAGGCGCCA AGCCAGGCGA GGGTGGCCAG
CTCCCGGGCC AGAAGGTCTA CCCCTGGATC GCGAAGACGC GCATGGCGAC CCCCGGTGTG
GGGCTCATCT CCCCGCCCCC CCACCATGAC ATCTACTCCA TCGAAGACCT CGCCCAGCTG
ATCTACGACC TCAAGGCGGC CAATCCGCGG GCACGGGTGC ACGTCAAGCT GGTCGCCGAG
GCCGGCGTCG GCACGGTGGC CGCTGGGGTC GCCAAGGCGC ACGCCGATGT GATCTTGATC
TCCGGTGGCG ACGGCGGGAC GGGAGCGGCT CCACTCACGT CGCTCGCCCA CGCAGGGAGT
CCCTGGGAGC TCGGCCTCGC CGAGGCGCAC CAGACTCTGC TCGCCAACGG GCTGCGCGAT
CGGGTGACCC TCCAGGTGGA CGGCCAGCTC AAGACCGCAC GCGACGTGAT CGTCGCCGCG
CTCCTCGGTG CCGAGGAGTT CGGTTTTGCG ACCACCGCGC TCGTGGTGTC GGGGTGCATC
ATGATGCGGG TGTGCCACCA GGACACCTGC CCGGTCGGGA TCGCCACGCA GAATCCGGTC
CTTCGCGAGC GCTACAGCGG TCGGCCGGAG TTCGTCGAGC AGTTCTTCTG GTTCCTCGCC
GACGAGGTGC GCGCGTGGCT GGCCAAGCTC GGCGCCCGGT CGTTGGACGA GATCATCGGT
CGTGCGGACC TGCTCGAGGT CGTGGATGCA CCGGAGGCAC GCCAGCTCGG ACTCGAACGG
CTGACGTGGG CGCCGGAGCC GTGGCCGGGG CAGGCGCGCC GGCGGGTTCG CTCCCAACCC
GACGTGCTGG CCGGGCGGCT CGACGAGGAC ATCATCGCCC AAGCCGAGGC GGCGCTCGAG
CGCGGCGAGG GGGTGACCAT CGCCGCCGAG GTCACCAACA CCGATCGGGC GGTCGGGACC
ACCCTCGGCT ACGAACTCAC CCGACGGTGG GGGGAGGCGG GGCTCGCCGA CGACACCATC
GTGCTGCGCC TCAGCGGAGC CGCCGGCCAA TCGCTCGGGG CGTTCGTGCC GCGCGGGGTC
ACGGTGGAGC TCGTCGGCGA GGCCAACGAC TACGTCGGCA AGGGGCTCTC CGGTGGGCGG
CTCATCGTTC GTCCTCCGGC CCAGGCCGCC TGGTCGACGG ACGACACCAT CATCGTCGGC
AACGTCGCCC TCTTCGGCGC GACGAGCGGG GAGTGCTTCG TTCGCGGTGT GGCTGGGGAG
CGCTTTGCCG TTCGCAACTC GGGCGCCGTC GCGGTGGTCG AGGGCGTCGG TGATCACGGG
TGCGAGTACA TGACCGGTGG TCTCGTGGTG GTGCTGGGGC GGTTCGGACG CAACTTTGCG
GCGGGCATGT CGGGCGGGCT CGCGTTCTTG TGGGATCCCG ACGAGCGGTT GCTGGCGCGC
GTGAACCAGA GTCTCGTCGA CCTCGATCCC GTTCCCGATG AGGAGCGTGA TCGACTCTGG
AACCTCGTCG CTCGGCACGC AGAGCTGACC GGATCGCACC GAGCGCGCCA GATCGTGGCC
GAGGGTCCGG GTGCTCTCGA TCGCTTCCTC TGCGTCTACC CGCGCGACTT CAAGCGCGTT
CGGAGCGAGA TGGGACGCGC CGCCCTGCGT CAGCGCACCC CGACCGCGTC ATGA
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| Protein sequence | MDDRLGRSLP PLYRPDAEHD ACGIAALARL DGVRSHALVE QALGALVNLE HRGAKGAEPD
TGDGAGILTQ NPDAYWRSLG IDLPDEGAYV TGIAFAERSV EELRDALASG LGPELRLIAE
RAVPRDSSVL GATARRSEPT MVQVFLASTQ GRRDEALEID AWLARRRLEH AHPWLYFPSL
SGRTMVWKGM LSAPQVAAYY RDLEAEELTS ALALVHSRFS TNTMPSWRLA HPFRMVAHNG
EINTIRGNRA WMRARESLLA HPELGPRLAE ALPITRTDES DSASFDAVFE LLVRGGRSLA
HAILMMIPEA WEHNEEMEPR VRDFYRFHSS LMEPWDGPAA VVFTNGREVG AVLDRNGLRP
ARWWRTDDGL VVLGSEAGIV DVAPDHIVAK GRLEPGRVFL VDTERGEVLD DLAVKRELAG
AAPWGAWLAA NLVTLDDLAP RTMLIPQHGS IVTRQQLFGY TEEEVRRIVT PMAERGEEPI
GSMGADIPPA VRSEAHRPLW DFFVEQFAQV TNPPLDAIRE ELVTSAAGTI GPEQNLLVPE
PTAARQIFLP HPVLDNDELA KLLYIDEDGE HADLRAHAID MLYPVAEGPS GLEAAIGRIR
DEAVQAIERG AAVIVLSDRH ASAELAPIPS LLATSAVHHH LVRHRLRTRA GLVVECGDAR
EVHHFAALIG FGAAAVNPYL VFDTIVDRMR AGLIVGPTPR QAMRNYVKAA TKGVVKVMSK
MGISTIASYT GAQVFEAIGL ARDLVDEYFP GTPAPIEGIG LREIHETVAY HHRRAFEVRP
EAEAHRELEV GGLYQWRREG EYHLFNPETV FLLQHATREG RIEVFRRYEQ LVDEGARRFA
TLRGLLAIRE AADPLPIEEV EPAEAIVTRF ATGAMSYGSI SKEAHETLAI AMNRIGARSN
SGEGGEDAER AFPDADGLDR RSRIKQVASG RFGVTSFYLA SADDLQIKIA QGAKPGEGGQ
LPGQKVYPWI AKTRMATPGV GLISPPPHHD IYSIEDLAQL IYDLKAANPR ARVHVKLVAE
AGVGTVAAGV AKAHADVILI SGGDGGTGAA PLTSLAHAGS PWELGLAEAH QTLLANGLRD
RVTLQVDGQL KTARDVIVAA LLGAEEFGFA TTALVVSGCI MMRVCHQDTC PVGIATQNPV
LRERYSGRPE FVEQFFWFLA DEVRAWLAKL GARSLDEIIG RADLLEVVDA PEARQLGLER
LTWAPEPWPG QARRRVRSQP DVLAGRLDED IIAQAEAALE RGEGVTIAAE VTNTDRAVGT
TLGYELTRRW GEAGLADDTI VLRLSGAAGQ SLGAFVPRGV TVELVGEAND YVGKGLSGGR
LIVRPPAQAA WSTDDTIIVG NVALFGATSG ECFVRGVAGE RFAVRNSGAV AVVEGVGDHG
CEYMTGGLVV VLGRFGRNFA AGMSGGLAFL WDPDERLLAR VNQSLVDLDP VPDEERDRLW
NLVARHAELT GSHRARQIVA EGPGALDRFL CVYPRDFKRV RSEMGRAALR QRTPTAS
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