Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1961 |
Symbol | |
ID | 8324061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 2058643 |
End bp | 2059260 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644953088 |
Product | GrpE protein |
Protein accession | YP_003110538 |
Protein GI | 256372714 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0576] Molecular chaperone GrpE (heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.388028 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCAAGC CGTACGGAGA CGACGCCGAC GAGCCGGTGA CGCCGTCCGA GGACGCCACG CCCGTCGGGG GGTCCCCCCC CGACGGGACG ACCGGCGACG ACGAGCCGAC CGCGGAGGTG CAGCCGAGCC CCGACGACGA GGGGCGAGAG AGCGATCCGG TCCTCGCGGC GATCATGGAG GACCTCGCAG CCGTCACACG GGAGCGCGAC GAGTTCCTCG AGACCGCACA GCGGCTCCAG GCGGAGTTCA AGAACTACCG CGAGCGTGTC GCGCGCCAAC AGGCCGAGGC CGGTCAAGCT GCGGTCGCGA GCTTCGTGAC GAAGCTCCTG CCGGCGCTCG ACACCTTGAA CCTCGCCCTC GCCCACGCCC GTGCGGAGGG CTCCGAGGAG ACGACGAGTG CGCTCGCCCA GGTGCACGGC GTCTTCCACG AGGTGCTGAC CAAGGAAGGG CTCGAGGTCG TCGAGCCCAT CGGCAAGCGC TTCGACCCGA CCGAGGCCGA TGCGGTGGCC CACGAGGAGG GCGAGGGCGA GCCCACGGTC ACGGAGGTGT TCCGGGCGGG GTACCGCTGG CGCGGACAGG TCATCCGACC AGCGATGGTG CGTGTGAGCG GATCGTGA
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Protein sequence | MGKPYGDDAD EPVTPSEDAT PVGGSPPDGT TGDDEPTAEV QPSPDDEGRE SDPVLAAIME DLAAVTRERD EFLETAQRLQ AEFKNYRERV ARQQAEAGQA AVASFVTKLL PALDTLNLAL AHARAEGSEE TTSALAQVHG VFHEVLTKEG LEVVEPIGKR FDPTEADAVA HEEGEGEPTV TEVFRAGYRW RGQVIRPAMV RVSGS
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