Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1942 |
Symbol | |
ID | 8324042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | + |
Start bp | 2036028 |
End bp | 2037464 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644953069 |
Product | amidophosphoribosyltransferase |
Protein accession | YP_003110519 |
Protein GI | 256372695 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase |
TIGRFAM ID | [TIGR01134] amidophosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGACC ACCCCACCCA CGGCTCCGAG CAAGGCTCCG AAGCCGACCA CCCAGAGGAA GCCTGTGGCG TCTTCGGTGT GCTCGTCGCG TCCGAGGACG AGCAAGCCTC GTTCGCCGTA TTCGACGGCC TCTATGCGCT GCAGCACCGT GGACAAGAGT CAGCAGGCAT CGCCGCCGTC GACGACGGTC GTATCACGGT CGTGAAGGAC CTCGGGCTCG TGGCGTCGGT CTTCGACGAG GCGACCCTGC GTGCGCTGCG CGGTCGGCTC GCGATCGGGC ATACGCGCTA CGCCACGGCT GGCGACCGAG GATGGGAGAA CGCCCAGCCG CTCCTCCACG ACCACGCCGG CGCCCAGATC GCCGTCGCCC ACAACGGCAA CCTCACCGAC CCGCCTCAGA CGCCAGCCCC CAACGGCCGG ATCCCTTCGG ACACCGAACG GATCGCCGCG GCCGTCGCCG AGGCCCTCGG ATCGGCGACG ACGCCAGCGG CCGTTGCGGA AGCCGTCGCG CATGCCCTCG CGCCCCTTCA TGGGGCCTTC TCGCTCGTCA TGACCGACGG CCAGCACCTC ATCGCCGCTC GCGATCGCCA CGGCTTTCGC CCCCTGTGCG TCGGCCGCTT CCCCGATGGC GGTTGGGTGG TGGCCTCCGA GACGCCCGCA CTCGACGTCG TGGGCGCAAG CTTCGAGCGC GAGGTGGACC CCGGTGAGGT CCTCGTCATC GGCGACGACG CCCAGGCGAG CTCCTCGCTC CCCGGACCCC ACTTCCAGCA TCTGTGTGTC TTCGAATTCG TCTACTTCGC GCGTCCCGAT GCCAAGCTGC TGGGCCGAGA GGTGCACGGT ACGCGCCGTC GGATGGGCGA GCATCTCGCG CGCGTCGCAC CCGTCGAGGC CGACATGGTG ATGGGCGTGC CCGACTCTGG CATCCCTGCC GCCGAGGGCT ACGCCCTCGC CTCCGGTATC CCCTATGGCC AGGGACTCGT GAAGAATCGC TACATCGGGC GCACCTTCAT CAACCCCGGG GCTGCGCAGC GCCGACAGGC GATCCGACGG AAGCTGAACG CCCTCGAGGA CAACGTCCGA GGCAAGCGCC TCGTCGTGGT CGACGACTCC ATCGTGCGCG GTGCGACGAC ACGTCAGCTC GTCGCCCTGC TGCGCCAGGC GGGGGCGGCC GAAGTCCACC TGCGCATCTC GTCGCCTCCG TACCGCTGGC CCTGCTACTA CGGGATCGAC ACGCCGAGTC GCCCCGAGCT CATCGCCTCC CGCCTGTCCG TCGACGAGAT CGCCCAAGAA CTCGGGGCGG ACTCGCTCGC CTATCTCCCG CTTGCGCACC TGCGAGACGC CGTTGGCGTG ACCCATGGCT GCTGCGATGC CTGCTTGACC GGGGCATACC CCGAGACGGT CAGCGAAGCG GCAGCCGCGG GTGCGGGCTC GCGGTGA
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Protein sequence | MDDHPTHGSE QGSEADHPEE ACGVFGVLVA SEDEQASFAV FDGLYALQHR GQESAGIAAV DDGRITVVKD LGLVASVFDE ATLRALRGRL AIGHTRYATA GDRGWENAQP LLHDHAGAQI AVAHNGNLTD PPQTPAPNGR IPSDTERIAA AVAEALGSAT TPAAVAEAVA HALAPLHGAF SLVMTDGQHL IAARDRHGFR PLCVGRFPDG GWVVASETPA LDVVGASFER EVDPGEVLVI GDDAQASSSL PGPHFQHLCV FEFVYFARPD AKLLGREVHG TRRRMGEHLA RVAPVEADMV MGVPDSGIPA AEGYALASGI PYGQGLVKNR YIGRTFINPG AAQRRQAIRR KLNALEDNVR GKRLVVVDDS IVRGATTRQL VALLRQAGAA EVHLRISSPP YRWPCYYGID TPSRPELIAS RLSVDEIAQE LGADSLAYLP LAHLRDAVGV THGCCDACLT GAYPETVSEA AAAGAGSR
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