| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1922 |
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| Symbol | |
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| ID | 8324019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 2008773 |
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| End bp | 2011106 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644953046 |
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| Product | nucleic acid binding OB-fold tRNA/helicase-type |
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| Protein accession | YP_003110499 |
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| Protein GI | 256372675 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGAGG AACCGTCCGA GCGCTTCGCG CGCTCCTTCA CCCCCTCGCA GCCCACACCG
CTCGCTGCCC TCGAGAGCTA CGAGGTCCCC GAGAAGCTCA GCTATCGGCT GAAGAACTGG
CTGCTCGGGC GACCACTGAT CAACGAGGAG CTGAGTTCGG AGCGCCTCGG CAAACCGACC
GCGCTCGCGA TCCTCTCGTC CGACGTCATG TCCTCGTCGG CCTATGCCAC CGAGGCGAGC
CTCGGTGTCT TGGTCCCGGC GGTCGGGATC GCCGCCTACC ACCTCATCGT GCCGGTGTCG
CTCCTCGTCA TCGTGGTGCT GATCTTCGTG GCGGCTTCGT ATCTCGAGGT GATCCGGGCC
TTCCCGAAGG CGGGAGGCGC CTACATCGTC GCGCGCGAGA CCTTCGGCCT GTGGCTCGCG
CAGATCGCGG CCGCATCGCT CTTCATCGAC TACACCCTCA CCGTTGCGGT CTCCGTGGCG
GCCGGTGTCG ACGCGATCGC CTCCGCCATC CCGGCGCTCG TCCCCTTCAT CACGCCGATC
GGCGTCGTCT TCGTCATCGG CATGGCCTTC GGCAATCTGC GTGGGCTGCG CGAAGCCGGG
CGCACCTTCG CGCTGCCGAC GTTCCTCTTC ATCGGCTCGA TGCTGCTCAT GATCGCGGTG
GGCACGGTTC GCGCGCTGGT TGGCCACATC CATCACTACG CCATCATCGC CCCCGGTGCG
TTCCCGGCCG GCAAGCCAGG CGGTGGCCTT CTCGTCGGCG CCAGCGTCTT CATCGTGCTC
AAGTCGTTCG CCTCCGGCGG CACAGCCCTC ACCGGCACGG AAGCCATCTC GAACGGGGTC
TCGGTCTTTC GCGATCCCCA GGTGCACAAC GCTCGCGTGA CGCTGATCTG GATGAGCGTC
ATCCTCGGCA CGCTCTTTCT CGGGGTGTCT GGCCTGGCTG CGACGACCCA CGCCGTGCCG
TATCTCTCGG GAGCGCCGAC CGTGCTCTCG CAGGTGGCGC AGGCGGCCTT TGGCCAAAGT
TCGGTCGGTC ACGTCCTCAC GGTGATCCTC GACATCTCGA CGACGGCGAT CTTGACCTTG
GCTGCGAACA CGTCGTTCAC GGGATTCCCG TTGCTCGCGT CGTTTGCGGC GACGGACGGC
CTCCTGCCCC GGCGCTTCCG TGAGCGTGGC CACCGGTTGG TCTACTCGAC CGCGATCGTG
ATCGTCGCGG CGATCGCGAT CGTGCTCCTC GTCGCAACGA ACTCCAACAT CAATTCGTTG
ATCTCCCTCT ATGCCATCGG TGTCTTCACC GGCTTTACCA TCGCCGGTAG CGGCATGGTT
CGCTACCACC TCATCCACAA GGAGGACCAC TGGCGCCGGC GGGCGATCGT CAACGGATCG
TCGGCCATCT TGTCGGCGAT CGTGGACATC GTCTTCATCG TGACGAAGTT CACCTCGGGC
GCCTGGCTGG TCGTCGTCGT CGTCCCACTG CTGGTCTTCA TGTTCACGCG GTTCCGTCGT
CGCTTCGAGC GCGAGGCCGC CGCCCTGGAG GAGGGGGTGG CGGCGGCCTG TGAGGCTCCG
GCCGCTCGGA CGCACGTGGT GTTGCTGTTC GTCGATCGCG TCGATCTCGC CACGGCGCGG
GCGGTCCAGT ACGCCAAGCT GCTCCTGCCC GACGCGCTGC GTGCCGTGCA CCTCGTCGTC
GATGCACAGG AGGCGACGAC GCTCCGAGCC GAGTGGGAGC AGGCAGGCTT GGCGAACCTC
GAGCTCGAGC TCGTCGAGTG CCCGGATCGC CGCCTTCGGC GAGGCGCGGC CGAGGTCGTG
CTCGATGCGG TCGCATCAGG CAGCGACGTC GAGGTCTCAG CGATCATCCC GCACCGTGTC
TACGGGCGGA TCCTCGGCCC GCTGCTCCAC GACCAGTCGG CGGTGCAGAT CTCCCAAGTC
GTCGGGGAGC TGCCACACGC CACGGCCATC CTCGTACCCT ATCGAGTCCG CACGCGCAGT
GCCCGTACGA CGGTCACGGC GAAGGCCCGC CGCACCACGT TGGGGACGAA GGCGCCCGAG
CTCACCGACG GCACCACGCC TGTCTCGGCC TGCACGCCGC GGCGCCAGGC CACGGTCGTG
GGGCGTATCG CGGCGGTGCG CACCCGCACG CTCGATGGGA TGCCGATGAG CGTGGCGCGG
CTCGAGGACG CCACCGGTGG TATCCTCCTC GTCTTCCCCG GCCGTCGCCA GGTACCGGGG
ATCGCCGCCG GTGCGACGAT CCGCGCAGCG GGTACGGTAG GGGAGTTCCA GGGTCGGCTC
GCGATGATGA ACCCGAGCTA CGAGTTCCTC GAGCCGGCCC ACCAGGAGTC CTAG
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| Protein sequence | MSEEPSERFA RSFTPSQPTP LAALESYEVP EKLSYRLKNW LLGRPLINEE LSSERLGKPT
ALAILSSDVM SSSAYATEAS LGVLVPAVGI AAYHLIVPVS LLVIVVLIFV AASYLEVIRA
FPKAGGAYIV ARETFGLWLA QIAAASLFID YTLTVAVSVA AGVDAIASAI PALVPFITPI
GVVFVIGMAF GNLRGLREAG RTFALPTFLF IGSMLLMIAV GTVRALVGHI HHYAIIAPGA
FPAGKPGGGL LVGASVFIVL KSFASGGTAL TGTEAISNGV SVFRDPQVHN ARVTLIWMSV
ILGTLFLGVS GLAATTHAVP YLSGAPTVLS QVAQAAFGQS SVGHVLTVIL DISTTAILTL
AANTSFTGFP LLASFAATDG LLPRRFRERG HRLVYSTAIV IVAAIAIVLL VATNSNINSL
ISLYAIGVFT GFTIAGSGMV RYHLIHKEDH WRRRAIVNGS SAILSAIVDI VFIVTKFTSG
AWLVVVVVPL LVFMFTRFRR RFEREAAALE EGVAAACEAP AARTHVVLLF VDRVDLATAR
AVQYAKLLLP DALRAVHLVV DAQEATTLRA EWEQAGLANL ELELVECPDR RLRRGAAEVV
LDAVASGSDV EVSAIIPHRV YGRILGPLLH DQSAVQISQV VGELPHATAI LVPYRVRTRS
ARTTVTAKAR RTTLGTKAPE LTDGTTPVSA CTPRRQATVV GRIAAVRTRT LDGMPMSVAR
LEDATGGILL VFPGRRQVPG IAAGATIRAA GTVGEFQGRL AMMNPSYEFL EPAHQES
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